ART IS LONG AND TIME IS FLEETING - THE CURRENT PROBLEMS AND FUTURE-PROSPECTS FOR TIME-RESOLVED ENZYME CRYSTALLOGRAPHY

被引:8
作者
PETSKO, GA
机构
来源
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES | 1992年 / 340卷 / 1657期
关键词
D O I
10.1098/rsta.1992.0070
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
I offer comments on the challenges and problems of the future based on the papers in this volume. First. the requirement of the Laue technique for a very well-ordered crystal is a major obstacle to many studies. Efforts to ease this problem are needed. Secondly, the fundamental issues in time-resolved crystallography are now chemical rather than crystallographic. Methods for the rapid initiation of many reactions must be developed. Thirdly, it is imperative that the kinetics of the process in question be studied in the crystal before any diffraction experiments are done. We need better ways to make those solid state kinetic measurements. Fourthly, we should make use of combined methods. such as cryoenzymology plus Laue diffraction or site-directed mutagenesis plus Laue diffraction. to bring many processes into the time regime in which we currently can work. Fifthly, we have to be able to deconvolute diffraction data that come from a mixture of two or three discrete species. Finally, no matter how powerful our synchrotrons get, it seems to me that some of the most important events in any enzymatic reaction are not going to be accessible: consider the formation and decomposition of a transition state as an example. I close by discussing the role of computational biochemistry in filling in those frames of our enzymatic movie that we cannot observe directly by time resolved X-ray crystallography.
引用
收藏
页码:323 / 334
页数:12
相关论文
共 26 条
[1]   ON THE 3-DIMENSIONAL STRUCTURE AND CATALYTIC MECHANISM OF TRIOSE PHOSPHATE ISOMERASE [J].
ALBER, T ;
BANNER, DW ;
BLOOMER, AC ;
PETSKO, GA ;
PHILLIPS, D ;
RIVERS, PS ;
WILSON, IA .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES, 1981, 293 (1063) :159-171
[2]   CRYSTALLOGRAPHIC STUDIES OF CHICKEN TRIOSE PHOSPHATE ISOMERASE [J].
BANNER, DW ;
BLOOMER, AC ;
PETSKO, GA ;
PHILLIPS, DC ;
POGSON, CI .
COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 1971, 36 :151-&
[3]  
BASH PA, 1991, BIOCHEMISTRY-US, V30, P5821
[4]   CRYSTALLOGRAPHIC STUDIES OF ACTIVITY OF HEN EGE-WHITE LYSOZYME [J].
BLAKE, CCF ;
JOHNSON, LN ;
MAIR, GA ;
NORTH, ACT ;
PHILLIPS, DC ;
SARMA, VR .
PROCEEDINGS OF THE ROYAL SOCIETY SERIES B-BIOLOGICAL SCIENCES, 1967, 167 (1009) :378-+
[5]   LAUE DIFFRACTION FROM PROTEIN CRYSTALS USING A SEALED-TUBE X-RAY SOURCE [J].
BROOKS, I ;
MOFFAT, K .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1991, 24 (pt 2) :146-148
[6]   EXPERIMENTAL STRATEGIES IN LAUE CRYSTALLOGRAPHY [J].
CLIFTON, IJ ;
ELDER, M ;
HAJDU, J .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1991, 24 :267-277
[7]  
COLYER CA, 1990, J MOL BIOL, V212, P211
[8]   GREATLY REDUCED RADIATION-DAMAGE IN RIBONUCLEASE CRYSTALS MOUNTED ON GLASS-FIBERS [J].
DEWAN, JC ;
TILTON, RF .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1987, 20 (02) :130-132
[9]   CRYSTALLOGRAPHIC STUDIES OF THE MECHANISM OF XYLOSE ISOMERASE [J].
FARBER, GK ;
GLASFELD, A ;
TIRABY, G ;
RINGE, D ;
PETSKO, GA .
BIOCHEMISTRY, 1989, 28 (18) :7289-7297
[10]   A COMBINED QUANTUM-MECHANICAL AND MOLECULAR MECHANICAL POTENTIAL FOR MOLECULAR-DYNAMICS SIMULATIONS [J].
FIELD, MJ ;
BASH, PA ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1990, 11 (06) :700-733