SPECTROPHOTOMETRIC ASSAY FOR ENZYME-MEDIATED UNWINDING OF DOUBLE-STRANDED DNA

被引:36
作者
HOUSTON, P [1 ]
KODADEK, T [1 ]
机构
[1] UNIV TEXAS,DEPT CHEM,AUSTIN,TX 78712
关键词
HELICASE; FLUORESCENCE; DRUG SCREENING;
D O I
10.1073/pnas.91.12.5471
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A method is described for monitoring the enzyme-mediated unwinding of duplex DNA spectrophotometrically. The assay employs a partially duplex oligonucleotide substrate modified at the complementary end with coumarin and fluorescein moieties. When in close proximity the fluorescein quenches the fluorescence of coumarin. However, when the strands are separated by the action of a DNA helicase, the coumarin fluorescence increases greatly. Therefore, the progress of enzyme-mediated DNA unwinding can be measured in real time by fluorescence spectroscopy. This assay provides a simple method to screen for helicase inhibitors, which are of growing interest as potential anticancer agents. The application of this technique to kinetic analyses of the mechanism of action of DNA helicases is also discussed.
引用
收藏
页码:5471 / 5474
页数:4
相关论文
共 18 条
[1]  
ARAMATUNGA M, 1993, BIOCHEMISTRY-US, V32, P6815
[2]   INVITRO REPLICATION THROUGH NUCLEOSOMES WITHOUT HISTONE DISPLACEMENT [J].
BONNEANDREA, C ;
WONG, ML ;
ALBERTS, BM .
NATURE, 1990, 343 (6260) :719-726
[3]   DETECTION OF NUCLEIC-ACID HYBRIDIZATION BY NONRADIATIVE FLUORESCENCE RESONANCE ENERGY-TRANSFER [J].
CARDULLO, RA ;
AGRAWAL, S ;
FLORES, C ;
ZAMECNIK, PC ;
WOLF, DE .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1988, 85 (23) :8790-8794
[4]   FLUORESCENCE STUDY OF THE TOPOLOGY OF MESSENGER-RNA BOUND TO THE 30S RIBOSOMAL-SUBUNIT OF ESCHERICHIA-COLI [J].
CZWORKOWSKI, J ;
ODOM, OW ;
HARDESTY, B .
BIOCHEMISTRY, 1991, 30 (19) :4821-4830
[5]   CONFORMATIONAL DISTRIBUTIONS OF A 4-WAY DNA JUNCTION REVEALED BY TIME-RESOLVED FLUORESCENCE RESONANCE ENERGY-TRANSFER [J].
EIS, PS ;
MILLAR, DP .
BIOCHEMISTRY, 1993, 32 (50) :13852-13860
[6]  
HACKER KJ, 1992, J BIOL CHEM, V267, P20674
[7]  
JONGENEEL CV, 1984, J BIOL CHEM, V259, P2933
[8]  
JONGENEEL CV, 1984, J BIOL CHEM, V259, P2925
[9]   STIMULATION OF PROTEIN-DIRECTED STRAND EXCHANGE BY A DNA HELICASE [J].
KODADEK, T ;
ALBERTS, BM .
NATURE, 1987, 326 (6110) :312-314
[10]  
LOHMAN TM, 1993, J BIOL CHEM, V268, P2269