Distributed parameter filtering theory is employed for estimating the state variables and associated error covariances of a dynamical distributed system under highly tandem tidal and meteorological influences. The stochastic-deterministic mathematical model of the physical system under study consists of the shallow water equations described by the momentum and continuity equations in which the external forces such as Coriolis force, wind friction, and atmospheric pressure are considered. White Gaussian noises in the system and measurement equations are used to account for the inherent stochasticity of the system. By using an optimal distributed parameter filter, the information provided by the stochastic dynamical model and the noisy measurements taken from the actual system are combined to obtain an optimal estimate of the state of the system, which in turn is used as the initial condition for the prediction procedure. The approach followed here has numerical approximation carried out at the end, which means that the numerical discretization is performed in the filtering equations, and not in the equations modeling the system. Therefore, the continuous distributive nature of the original system is maintained as long as possible and the propagation of modelling errors in the problem is minimized. The appropriateness of the distributed parameter filter is demonstrated in an application involving the prediction of storm surges in the North Sea. The results confirm excellent filter performance with considerable improvement with respect to the deterministic prediction.