SPLIT DECOMPOSITION - A TECHNIQUE TO ANALYZE VIRAL EVOLUTION

被引:50
作者
DOPAZO, J
DRESS, A
VONHAESELER, A
机构
[1] UNIV VALENCIA, DEPT GENET, E-46100 BURJASSOT, SPAIN
[2] UNIV BIELEFELD, DEPT MATH, W-4800 BIELEFELD, GERMANY
关键词
EVOLUTIONARY TREES; QUASI-SPECIES; OVERLAPPING CLUSTERING;
D O I
10.1073/pnas.90.21.10320
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A clustering technique allowing a restricted amount of overlapping and based on an abstract theory of coherent decompositions of finite metrics is used to analyze the evolution of foot-and-mouth disease viruses. The emerging picture is compatible with the existence of viral populations with a quasispecies structure and illustrates various forms of evolution of this virus family. In addition, it allows the correlation of these forms with geographic occurrence.
引用
收藏
页码:10320 / 10324
页数:5
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