2 CRYSTAL-STRUCTURES OF A POTENTLY SWEET PROTEIN - NATURAL MONELLIN AT 2-CENTER-DOT-75 ANGSTROM RESOLUTION AND SINGLE-CHAIN MONELLIN AT 1-CENTER-DOT-7 ANGSTROM RESOLUTION

被引:82
作者
SOMOZA, JR
JIANG, F
TONG, L
KANG, CH
CHO, JM
KIM, SH
机构
[1] UNIV CALIF BERKELEY, GRAD GRP BIOPHYS, BERKELEY, CA 94720 USA
[2] LAWRENCE BERKELEY LAB, DIV STRUCT BIOL, BERKELEY, CA 94720 USA
[3] UNIV CALIF BERKELEY, DEPT CHEM, BERKELEY, CA 94720 USA
[4] LUCKY BIOTECH, EMERYVILLE, CA 94608 USA
关键词
MONELLIN; SINGLE-CHAIN MONELLIN; SWEET PROTEIN; X-RAY CRYSTAL STRUCTURE; PROTEIN ENGINEERING;
D O I
10.1006/jmbi.1993.1594
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Two refined structures of the sweet-tasting protein monellin are presented. The structure of natural monellin has been refined at 2.75 Å resolution. The final model consists of four monellin molecules in the asymmetric unit, encompassing 3136 non-hydrogen atoms. The cryatallographic R-factor is 0.193 for the 8853 reflections between 6.0 Å and 2.75 Å resolution, and the root-mean-square deviations from ideality are 0.017 Å for bond lengths and 3.6° for bond angles. The refined structure generally confirms, with some difference in detail, the initial backbone model of monellin that was based on 3.0 Å resolution data. Single-chain monellin (scm) was genetically engineered by fusing the two chains of monellin into a single 94-residue polypeptide. Using the refined monellin coordinates as a search model, the crystal structure of scm has been solved with the techniques of molecular replacement, and has been refined against data to 1.7 Å resolution. The final model consists of two scm molecules per asymmetric unit, and includes 137 bound water molecules. The crystallographic R-factor for this model is 0.74 for the 15,053 reflections (|F0| > 2σ(F0)) between 6.0 Å and 1.7 Å resolution. The root-mean-square deviations from ideal bond lengths and angles are 0.015 Å and 2.86°, respectively, and the average coordinate error is approximately 0.2 Å, as estimated from a Luzzati plot. The error in the model was also estimated by comparing the two molecules in the asymmetric unit. The most significant differences between the two molecules occur in loop regions and at the C terminus of the protein, and are generally correlated to differences in crystal packing contacts. Linking the two chains of monellin has not substantially altered the structure beyond the region immediately surrounding the new peptide bond. Like natural monellin, the conformation of scm is dominated by a 17-residue α-helix folded into the concave side of a twisted, five-strand anti-parallel β-sheet. We expect that the availability of a high-resolution structure of scm, along with the convenience of producing site-specific mutants of this protein, will make scm a good model with which to probe the structural basis of sweetness.
引用
收藏
页码:390 / 404
页数:15
相关论文
共 52 条
[1]   THE 2.0 A X-RAY CRYSTAL-STRUCTURE OF CHICKEN EGG-WHITE CYSTATIN AND ITS POSSIBLE MODE OF INTERACTION WITH CYSTEINE PROTEINASES [J].
BODE, W ;
ENGH, R ;
MUSIL, D ;
THIELE, U ;
HUBER, R ;
KARSHIKOV, A ;
BRZIN, J ;
KOS, J ;
TURK, V .
EMBO JOURNAL, 1988, 7 (08) :2593-2599
[2]   STRUCTURE OF MONELLIN AND ITS RELATION TO SWEETNESS OF PROTEIN [J].
BOHAK, Z ;
LI, SL .
BIOCHIMICA ET BIOPHYSICA ACTA, 1976, 427 (01) :153-170
[3]   ELECTROPHYSIOLOGICAL STUDY OF GUSTATORY EFFECTS OF SWEET PROTEINS MONELLIN AND THAUMATIN IN MONKEY, GUINEA-PIG AND RAT [J].
BROUWER, JN ;
HELLEKANT, G ;
KASAHARA, Y ;
VANDERWE.H ;
ZOTTERMAN, Y .
ACTA PHYSIOLOGICA SCANDINAVICA, 1973, 89 (04) :550-557
[4]   SLOW-COOLING PROTOCOLS FOR CRYSTALLOGRAPHIC REFINEMENT BY SIMULATED ANNEALING [J].
BRUNGER, AT ;
KRUKOWSKI, A ;
ERICKSON, JW .
ACTA CRYSTALLOGRAPHICA SECTION A, 1990, 46 :585-593
[5]   EXTENSION OF MOLECULAR REPLACEMENT - A NEW SEARCH STRATEGY BASED ON PATTERSON CORRELATION REFINEMENT [J].
BRUNGER, AT .
ACTA CRYSTALLOGRAPHICA SECTION A, 1990, 46 :46-57
[6]  
BRUNGER AT, 1990, XPLOR MANUAL VERSION
[7]  
CAGAN RH, 1976, P SOC EXP BIOL MED, V152, P635
[8]   CONFORMATION ACTIVITY RELATIONSHIP OF SWEET MOLECULES - COMPARISON OF ASPARTAME AND NAPHTHIMIDAZOLESULFONIC ACIDS [J].
CASTIGLIONEMORELLI, MA ;
LELJ, F ;
NAIDER, F ;
TALLON, M ;
TANCREDI, T ;
TEMUSSI, PA .
JOURNAL OF MEDICINAL CHEMISTRY, 1990, 33 (02) :514-520
[9]   A TOBACCO MOSAIC VIRUS-INDUCED TOBACCO PROTEIN IS HOMOLOGOUS TO THE SWEET-TASTING PROTEIN THAUMATIN [J].
CORNELISSEN, BJC ;
VANHUIJSDUIJNEN, RAMH ;
BOL, JF .
NATURE, 1986, 321 (6069) :531-532
[10]  
DEVOS AM, 1985, P NATL ACAD SCI USA, V82, P1406