STRUCTURAL ORGANIZATION OF THE HUMAN SORBITOL DEHYDROGENASE GENE (SORD)

被引:24
作者
IWATA, T
POPESCU, NC
ZIMONJIC, DB
KARLSSON, C
HOOG, JO
VACA, G
RODRIGUEZ, IR
CARPER, D
机构
[1] NEI,MECHANISMS OCULAR DIS LAB,BETHESDA,MD 20892
[2] NEI,RETINAL CELL & MOLEC BIOL LAB,BETHESDA,MD 20892
[3] NCI,DIV CANC ETIOL,BIOL LAB,BETHESDA,MD 20892
[4] KAROLINSKA INST,DEPT MED BIOCHEM & BIOPHYS,STOCKHOLM,SWEDEN
[5] CTR INVEST BIOMED OCCIDENTE,INST MEXICANO SEGURO SOCIAL,GUADALAJARA,JALISCO,MEXICO
关键词
D O I
10.1016/0888-7543(95)80082-W
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The primary structure of human sorbitol dehydrogenase (SORD) was determined by cDNA and genomic cloning. The nucleotide sequence of the mRNA covers 2471 bp including an open reading frame that yields a protein of 356 amino acid residues. The gene structure of SORD spans approximately 30 kb divided into 9 exons and 8 introns. The gene was localized to chromosome 15q21.1 by in situ hybridization. Two transcription initiation sites were detected. Three Spl sites and a repetitive sequence (CAAA)(5) were observed in the 5' noncoding region; no classical TATAA or CCAAT elements were found. The related alcohol dehydrogenases and zeta-crystallin have the same gene organization split by 8 introns, but no splice points coincide between SORD and these gene types. The deduced amino acid sequence of the SORD structure differs at a few positions from the directly determined protein sequence, suggesting allelic forms of the enzyme. High levels of SORD transcripts were observed in lens and kidney, as judged from Northern blot analysis. (C) 1995 Academic Press, Inc.
引用
收藏
页码:55 / 62
页数:8
相关论文
共 42 条
[21]  
KINOSHIT.JH, 1974, INVEST OPHTH VISUAL, V13, P713
[22]  
KOJIS TL, 1993, AM J HUM GENET, V53, P1699
[23]   DUCK LACTATE DEHYDROGENASE-B/EPSILON-CRYSTALLIN GENE - LENS RECRUITMENT OF A GC-PROMOTER [J].
KRAFT, HJ ;
HENDRIKS, W ;
DEJONG, WW ;
LUBSEN, NH ;
SCHOENMAKERS, JGG .
JOURNAL OF MOLECULAR BIOLOGY, 1993, 229 (04) :849-859
[24]   HUMAN SORBITOL DEHYDROGENASE GENE - CDNA CLONING, SEQUENCE DETERMINATION, AND MAPPING BY FLUORESCENCE IN-SITU HYBRIDIZATION [J].
LEE, FK ;
CHEUNG, MC ;
CHUNG, S .
GENOMICS, 1994, 21 (02) :354-358
[25]   PURIFICATION AND CHARACTERIZATION OF HUMAN-LIVER SORBITOL DEHYDROGENASE [J].
MARET, W ;
AULD, DS .
BIOCHEMISTRY, 1988, 27 (05) :1622-1628
[26]   A CATALOG OF SPLICE JUNCTION SEQUENCES [J].
MOUNT, SM .
NUCLEIC ACIDS RESEARCH, 1982, 10 (02) :459-472
[27]  
NG K, 1992, J BIOL CHEM, V267, P24989
[28]   A COLD-INDUCIBLE BOMBYX GENE ENCODING A PROTEIN SIMILAR TO MAMMALIAN SORBITOL DEHYDROGENASE - YOLK NUCLEI-DEPENDENT GENE-EXPRESSION IN DIAPAUSE EGGS [J].
NIIMI, T ;
YAMASHITA, O ;
YAGINUMA, T .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1993, 213 (03) :1125-1131
[29]  
OZAWA K, 1993, J BIOL CHEM, V268, P27258
[30]   CHROMOSOMAL MAPPING OF THE HUMAN HISTONE GENE-H2AZ TO 4Q24 BY FLUORESCENCE IN-SITU HYBRIDIZATION [J].
POPESCU, N ;
ZIMONJIC, D ;
HATCH, C ;
BONNER, W .
GENOMICS, 1994, 20 (02) :333-335