AN INVENTORY OF 1152 EXPRESSED SEQUENCE TAGS OBTAINED BY PARTIAL SEQUENCING OF CDNAS FROM ARABIDOPSIS-THALIANA

被引:222
作者
HOFTE, H
DESPREZ, T
AMSELEM, J
CHIAPELLO, H
ROUZE, P
CABOCHE, M
MOISAN, A
JOURJON, MF
CHARPENTEAU, JL
BERTHOMIEU, P
GUERRIER, D
GIRAUDAT, J
QUIGLEY, F
THOMAS, F
YU, DY
MACHE, R
RAYNAL, M
COOKE, R
GRELLET, F
DELSENY, M
PARMENTIER, Y
DEMARCILLAC, G
GIGOT, C
FLECK, J
PHILIPPS, G
AXELOS, M
BARDET, C
TREMOUSAYGUE, D
LESCURE, B
机构
[1] INRA, BIOMETRIE & INTELLIGENCE ARTIFICIELLE LAB, F-31326 CASTANET TOLOSAN, FRANCE
[2] CNRS, UPR 40, INST SCI VEGETALES, F-91190 GIF SUR YVETTE, FRANCE
[3] UNIV JOSEPH FOURIER, BIOL MOLEC VEGETALE LAB, F-38041 GRENOBLE, FRANCE
[4] UNIV PERPIGNAN, CNRS, PHYSIOL & BIOL MOLEC VEGETALE LAB, F-66025 PERPIGNAN, FRANCE
[5] CNRS, UPR 406, INST BIOL MOLEC PLANTES, F-67084 STRASBOURG, FRANCE
[6] INRA, CNRS, UMR 05, BIOL MOLEC RELAT PLANTES MICROORGANISMES LAB, F-31326 CASTANET TOLOSAN, FRANCE
关键词
D O I
10.1046/j.1365-313X.1993.04061051.x
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
As part of the goal to generate a detailed transcript map for Arabidopsis thaliana, 1152 single run sequences (expressed sequence tags or ESTs) have been determined from cDNA clones taken at random in libraries prepared from different sources of plant material: developing siliques, etiolated seedlings, flower buds, and cultured cells. Eight hundred and ninety-five different genes could be identified, 32% of which showed significant similarity to existing sequences in Arabidopsis and an array of other organisms. These sequences in combination with their positioning on the Arabidopsis genetic map will not only constitute a new set of molecular markers for genome analysis in Arabidopsis but also provide a direct route for the in vivo analysis of their gene products. The sequences have been made available to the public databases.
引用
收藏
页码:1051 / 1061
页数:11
相关论文
共 34 条
[1]   SEQUENCE IDENTIFICATION OF 2,375 HUMAN BRAIN GENES [J].
ADAMS, MD ;
DUBNICK, M ;
KERLAVAGE, AR ;
MORENO, R ;
KELLEY, JM ;
UTTERBACK, TR ;
NAGLE, JW ;
FIELDS, C ;
VENTER, JC .
NATURE, 1992, 355 (6361) :632-634
[2]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[3]   MAP-BASED CLONING OF A GENE CONTROLLING OMEGA-3-FATTY-ACID DESATURATION IN ARABIDOPSIS [J].
ARONDEL, V ;
LEMIEUX, B ;
HWANG, I ;
GIBSON, S ;
GOODMAN, HM ;
SOMERVILLE, CR .
SCIENCE, 1992, 258 (5086) :1353-1355
[4]   USE OF A REPORTER TRANSGENE TO GENERATE ARABIDOPSIS MUTANTS IN UBIQUITIN-DEPENDENT PROTEIN-DEGRADATION [J].
BACHMAIR, A ;
BECKER, F ;
SCHELL, J .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (02) :418-421
[5]   PROPERTIES AND PARTIAL PROTEIN-SEQUENCE OF PLANT ANNEXINS [J].
BLACKBOURN, HD ;
BARKER, PJ ;
HUSKISSON, NS ;
BATTEY, NH .
PLANT PHYSIOLOGY, 1992, 99 (03) :864-871
[6]   INTERACTION OF A DEVELOPMENTALLY REGULATED DNA-BINDING FACTOR WITH SITES FLANKING 2 DIFFERENT FRUIT-RIPENING GENES FROM TOMATO [J].
CORDES, S ;
DEIKMAN, J ;
MARGOSSIAN, LJ ;
FISCHER, RL .
PLANT CELL, 1989, 1 (10) :1025-1034
[7]   INTERACTION OF A DNA-BINDING FACTOR WITH THE 5'-FLANKING REGION OF AN ETHYLENE-RESPONSIVE FRUIT RIPENING GENE FROM TOMATO [J].
DEIKMAN, J ;
FISCHER, RL .
EMBO JOURNAL, 1988, 7 (11) :3315-3320
[8]   AUXIN-RESISTANT MUTANTS OF ARABIDOPSIS-THALIANA WITH AN ALTERED MORPHOLOGY [J].
ESTELLE, MA ;
SOMERVILLE, C .
MOLECULAR AND GENERAL GENETICS, 1987, 206 (02) :200-206
[9]   THE MOLECULAR CHARACTERIZATION AND ORGANIZATION OF PLANT CHROMOSOMAL DNA-SEQUENCES [J].
FLAVELL, R .
ANNUAL REVIEW OF PLANT PHYSIOLOGY AND PLANT MOLECULAR BIOLOGY, 1980, 31 :569-596
[10]   CLONING AND SEQUENCE-ANALYSIS OF A CDNA CLONE FROM ARABIDOPSIS-THALIANA HOMOLOGOUS TO A PROTEASOME ALPHA-SUBUNIT FROM DROSOPHILA [J].
GENSCHIK, P ;
PHILIPPS, G ;
GIGOT, C ;
FLECK, J .
FEBS LETTERS, 1992, 309 (03) :311-315