dictyBase-a Dictyostelium bioinformatics resource update

被引：58

作者：

Fey, Petra ^{[1
,2
]}

Gaudet, Pascale ^{[1
,2
]}

Curk, Tomaz ^{[3
]}

Zupan, Blaz ^{[3
,4
]}

Just, Eric M. ^{[1
,2
]}

Basu, Siddhartha ^{[1
,2
]}

Merchant, Sohel N. ^{[1
,2
]}

Bushmanova, Yulia A. ^{[1
,2
]}

Shaulsky, Gad ^{[4
]}

Kibbe, Warren A. ^{[1
,2
]}

Chisholm, Rex L. ^{[1
,2
]}

机构：

[1] Northwestern Univ, Biomed Informat Ctr, Chicago, IL 60611 USA

[2] Ctr Genet Med, Chicago, IL 60611 USA

[3] Univ Ljubljana, Fac Comp & Informat Sci, Ljubljana 61000, Slovenia

[4] Baylor Coll Med, Dept Mol & Human Genet, Houston, TX 77030 USA

来源：

NUCLEIC ACIDS RESEARCH | 2009年 / 37卷

基金：

美国国家卫生研究院;

关键词：

RNA GENES; DATABASE; ANNOTATION; DISCOIDEUM; ONTOLOGY; SEQUENCE; GENOME;

D O I：

10.1093/nar/gkn844

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

dictyBase (http://dictybase.org) is the model organism database for Dictyostelium discoideum. It houses the complete genome sequence, ESTs and the entire body of literature relevant to Dictyostelium. This information is curated to provide accurate gene models and functional annotations, with the goal of fully annotating the genome. This dictyBase update describes the annotations and features implemented since 2006, including improved strain and phenotype representation, integration of predicted transcriptional regulatory elements, protein domain information, biochemical pathways, improved searching and a wiki tool that allows members of the research community to provide annotations.

引用

页码：D515 / D519

页数：5

共 21 条

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