High performance liquid chromatography-mass spectrometry for metabonomics: Potential biomarkers for acute deterioration of liver function in chronic hepatitis B

被引:132
作者
Yang, J
Zhao, XJ
Liu, XL
Wang, C
Gao, P
Wang, JS
Li, LJ
Gu, JR
Yang, SL
Xu, GW [1 ]
机构
[1] Chinese Acad Sci, Dalian Inst Chem Phys, Natl Chromatog R&A Ctr, Dalian 116023, Peoples R China
[2] Zhejiang Univ, Affiliated Hosp 1, Coll Med, Hangzhou 310027, Peoples R China
[3] Shanghai Jiao Tong Univ, Shanghai Canc Inst, Natl Lab Oncogenes & Related Genes, Shanghai 200032, Peoples R China
[4] Chinese Acad Sci, Shanghai Res Ctr Biotechnol, Shanghai, Peoples R China
关键词
metabonomics; hepatitis; LC; MS; PLS-DA; serum; biomarker;
D O I
10.1021/pr050364w
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Metabonomics methods have been successfully applied to the drug discovery, toxicology, phytochemistry, and clinical fields. Here, we report a self-developed metabonomics platform which is based on high performance liquid chromatog raphy- mass spectrometry (HPLC-MS) technique and applied to the investigation of acute deterioration of liver function in chronic hepatitis B to find the potential biomarkers. Sera from 50 healthy persons and 37 patients with acute deterioration of liver function in chronic hepatitis B were analyzed by HPLC-MS after removal of proteins. After de-noise, peak detection A, and peak alignment, the data of metabolites were fed to partial least squares discriminant analysis (PLS-DA) to find the potential biomarkers. According to the corresponding tandem mass results, several potential biomarkers were identified: Lysophosphaticlyl Choline (LPC) C18:0, LPC C16:0, LPC C18:1, LPC C18:2, and glycochenodeoxycholic acid (GCDCA) (or its isomer glycocleoxycholic acid (GDCA)). On the basis of the relevant literature and pathway databases, the biological significance of the present study is discussed.
引用
收藏
页码:554 / 561
页数:8
相关论文
共 55 条
[1]  
[Anonymous], 2005, US GUID SIMCA P SIMC, P397
[2]   An NMR-based metabolomic approach to the analysis of the effects of xenobiotics on endogenous metabolite levels in plants [J].
Bailey, NJC ;
Oven, M ;
Holmes, E ;
Zenk, MH ;
Nicholson, JK .
SPECTROSCOPY-AN INTERNATIONAL JOURNAL, 2004, 18 (02) :279-287
[3]   Metabolomic analysis of the consequences of cadmium exposure in Silene cucubalus cell cultures via 1H NMR spectroscopy and chemometrics [J].
Bailey, NJC ;
Oven, M ;
Holmes, E ;
Nicholson, JK ;
Zenk, MH .
PHYTOCHEMISTRY, 2003, 62 (06) :851-858
[4]   NMR-based metabonomic toxicity classification: hierarchical cluster analysis and k-nearest-neighbour approaches [J].
Beckonert, O ;
Bollard, ME ;
Ebbels, TMD ;
Keun, HC ;
Antti, H ;
Holmes, E ;
Lindon, JC ;
Nicholson, JK .
ANALYTICA CHIMICA ACTA, 2003, 490 (1-2) :3-15
[5]   A metabonomic investigation of hepatotoxicity using diffusion-edited 1H NMR spectroscopy of blood serum [J].
Beckwith-Hall, BM ;
Thompson, NA ;
Nicholson, JK ;
Lindon, JC ;
Holmes, E .
ANALYST, 2003, 128 (07) :814-818
[6]   NMR-based metabonomic studies on the biochemical effects of commonly used drug carrier vehicles in the rat [J].
Beckwith-Hall, BM ;
Holmes, E ;
Lindon, JC ;
Gounarides, J ;
Vickers, A ;
Shapiro, M ;
Nicholson, JK .
CHEMICAL RESEARCH IN TOXICOLOGY, 2002, 15 (09) :1136-1141
[7]   An NMR-based metabolomic approach to assess metabolism in splanchnic tissues of steers [J].
Bertram, HC ;
Kristensen, NB ;
Malmendal, A ;
Nielsen, NC ;
Jensen, SK ;
Harmon, DL .
JOURNAL OF ANIMAL AND FEED SCIENCES, 2004, 13 :295-298
[8]   19F NMR metabolomics for the elucidation of microbial degradation pathways of fluorophenols [J].
Boersma, MG ;
Solyanikova, IP ;
Van Berkel, WJH ;
Vervoort, J ;
Golovleva, LA ;
Rietjens, IMCM .
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY, 2001, 26 (1-2) :22-34
[9]   Investigations into biochemical changes due to diurnal variation and estrus cycle in female rats using high-resolution 1H NMR spectroscopy of urine and pattern recognition [J].
Bollard, ME ;
Holmes, E ;
Lindon, JC ;
Mitchell, SC ;
Branstetter, D ;
Zhang, W ;
Nicholson, JK .
ANALYTICAL BIOCHEMISTRY, 2001, 295 (02) :194-202
[10]  
Brindle JT, 2002, NAT MED, V8, P1439, DOI 10.1038/nm802