Assembly information services in the European Nucleotide Archive

被引：24

作者：

Pakseresht, Nima ^{[1
]}

Alako, Blaise ^{[1
]}

Amid, Clara ^{[1
]}

Cerdeno-Tarraga, Ann ^{[1
]}

Cleland, Iain ^{[1
]}

Gibson, Richard ^{[1
]}

Goodgame, Neil ^{[1
]}

Gur, Tamer ^{[1
]}

Jang, Mikyung ^{[1
]}

Kay, Simon ^{[1
]}

Leinonen, Rasko ^{[1
]}

Li, Weizhong ^{[1
]}

Liu, Xin ^{[1
]}

Lopez, Rodrigo ^{[1
]}

McWilliam, Hamish ^{[1
]}

Oisel, Arnaud ^{[1
]}

Pallreddy, Swapna ^{[1
]}

Plaister, Sheila ^{[1
]}

Radhakrishnan, Rajesh ^{[1
]}

Riviere, Stephane ^{[1
]}

Rossello, Marc ^{[1
]}

Senf, Alexander ^{[1
]}

Silvester, Nicole ^{[1
]}

Smirnov, Dmitriy ^{[1
]}

Squizzato, Silvano ^{[1
]}

ten Hoopen, Petra ^{[1
]}

Toribio, Ana Luisa ^{[1
]}

Vaughan, Daniel ^{[1
]}

Zalunin, Vadim ^{[1
]}

Cochrane, Guy ^{[1
]}

机构：

[1] European Bioinformat Inst, European Mol Biol Lab, Cambridge CB10 1SD, England

来源：

NUCLEIC ACIDS RESEARCH | 2014年 / 42卷 / D1期

基金：

英国生物技术与生命科学研究理事会;

关键词：

SEQUENCE;

D O I：

10.1093/nar/gkt1082

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is a repository for the world public domain nucleotide sequence data output. ENA content covers a spectrum of data types including raw reads, assembly data and functional annotation. ENA has faced a dramatic growth in genome assembly submission rates, data volumes and complexity of datasets. This has prompted a broad reworking of assembly submission services, for which we now reach the end of a major programme of work and many enhancements have already been made available over the year to components of the submission service. In this article, we briefly review ENA content and growth over 2013, describe our rapidly developing services for genome assembly information and outline further major developments over the last year.

引用

页码：D38 / D43

页数：6

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