Protonless NMR experiments for sequence-specific assignment of backbone nuclei in unfolded proteins

被引:155
作者
Bermel, W
Bertini, I [1 ]
Felli, IC
Lee, YM
Luchinat, C
Pierattelli, R
机构
[1] Bruker BioSpin GmbH, Rheinstetten, Germany
[2] Univ Florence, Dept Chem, I-50121 Florence, Italy
[3] Univ Florence, Dept Agr Biotechnol, Florence, Italy
关键词
D O I
10.1021/ja0582206
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Natively unfolded proteins are increasingly recognized to play important physiological roles. These proteins do not crystallize, so NMR is the only technique able to provide structural and dynamic information. However, in unfolded proteins, the proton chemical shift dispersion is poor, causing severe problems in resonance assignment. We designed a novel strategy based on two protonless experiments, a CBCACON-IPAP and a novel COCON-IPAP, that permits a straightforward and unequivocal backbone heteronuclear assignment of the natively unfolded protein α-synuclein. Copyright © 2006 American Chemical Society.
引用
收藏
页码:3918 / 3919
页数:2
相关论文
共 34 条
[1]   A strategy for the NMR characterization of type II copper(II) proteins:: the case of the copper trafficking protein CopC from Pseudomonas syringae [J].
Arnesano, F ;
Banci, L ;
Bertini, I ;
Felli, IC ;
Luchinat, C ;
Thompsett, AR .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (24) :7200-7208
[2]   Complete assignment of heteronuclear protein resonances by protonless NMR spectroscopy [J].
Bermel, W ;
Bertini, I ;
Duma, L ;
Felli, IC ;
Emsley, L ;
Pierattelli, R ;
Vasos, PR .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2005, 44 (20) :3089-3092
[3]   A selective experiment for the sequential protein backbone assignment from 3D heteronuclear spectra [J].
Bermel, W ;
Bertini, I ;
Felli, IC ;
Pierattelli, R ;
Vasos, PR .
JOURNAL OF MAGNETIC RESONANCE, 2005, 172 (02) :324-328
[4]   13C direct detection experiments on the paramagnetic oxidized monomeric copper, zinc superoxide dismutase [J].
Bermel, W ;
Bertini, I ;
Felli, IC ;
Kümmerle, R ;
Pierattelli, R .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (52) :16423-16429
[5]  
BERMEL W, 2005, J MAGN RESON, V177, P404
[6]  
BERMEL W, 2005, IN PRESS PROG NMR SP
[7]   NMR spectroscopy of paramagnetic metalloproteins [J].
Bertini, I ;
Luchinat, C ;
Parigi, G ;
Pierattelli, R .
CHEMBIOCHEM, 2005, 6 (09) :1536-1549
[8]   13C-13C NOESY:: A constructive use of 13C-13C spin-diffusion [J].
Bertini, I ;
Felli, IC ;
Kümmerle, R ;
Luchinat, C ;
Pierattelli, R .
JOURNAL OF BIOMOLECULAR NMR, 2004, 30 (03) :245-251
[9]   A heteronuclear direct-detection NMR spectroscopy experiment for protein-backbone assignment [J].
Bertini, I ;
Duma, L ;
Felli, IC ;
Fey, M ;
Luchinat, C ;
Pierattelli, R ;
Vasos, PR .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2004, 43 (17) :2257-2259
[10]   13C-13C NOESY:: An attractive alternative for studying large macromolecules [J].
Bertini, I ;
Felli, IC ;
Kümmerle, R ;
Moskau, D ;
Pierattelli, R .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (02) :464-465