Production and X-ray crystallographic analysis of fully deuterated human carbonic anhydrase II

被引:27
作者
Budayova-Spano, M
Fisher, SZ
Dauvergne, MT
Agbandje-McKenna, M
Silverman, DN
Myles, DAA
McKenna, R
机构
[1] Univ Florida, Dept Biochem & Mol Biol, Gainesville, FL 32610 USA
[2] European Mol Biol Lab, Grenoble Outstn, F-38042 Grenoble, France
[3] Inst Max Von Laue Paul Langevin, F-38042 Grenoble, France
[4] Univ Florida, Dept Pharmacol & Therapeut, Gainesville, FL 32610 USA
[5] Oak Ridge Natl Lab, Oak Ridge, TN 37831 USA
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2006年 / 62卷
关键词
D O I
10.1107/S1744309105038248
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Human carbonic anhydrase II (HCA II) is a zinc metalloenzyme that catalyzes the reversible hydration and dehydration of carbon dioxide and bicarbonate, respectively. The rate-limiting step in catalysis is the intramolecular transfer of a proton between the zinc-bound solvent (H2O/OH-) and the proton-shuttling residue His64. This distance (similar to 7.5 angstrom) is spanned by a well defined active-site solvent network stabilized by amino-acid side chains (Tyr7, Asn62, Asn67, Thr199 and Thr200). Despite the availability of high-resolution (similar to 1.0 angstrom) X-ray crystal structures of HCA II, there is currently no definitive information available on the positions and orientations of the H atoms of the solvent network or active-site amino acids and their ionization states. In preparation for neutron diffraction studies to elucidate this hydrogen-bonding network, perdeuterated HCA II has been expressed, purified, crystallized and its X-ray structure determined to 1.5 angstrom resolution. The refined structure is highly isomorphous with hydrogenated HCA II, especially with regard to the active-site architecture and solvent network. This work demonstrates the suitability of these crystals for neutron macromolecular crystallography.
引用
收藏
页码:6 / 9
页数:4
相关论文
共 27 条
[11]  
Hazemann I, 2005, ACTA CRYSTALLOGR D, V61, P1413, DOI [10.1107/S0907444905024285, 10.1107/S090744905024285]
[12]   C-13 NUCLEAR MAGNETIC-RESONANCE PROBE OF ACTIVE-SITE IONIZATIONS IN HUMAN CARBONIC-ANHYDRASE B [J].
KHALIFAH, RG ;
STRADER, DJ ;
BRYANT, SH ;
GIBSON, SM .
BIOCHEMISTRY, 1977, 16 (10) :2241-2247
[13]   PROCHECK - A PROGRAM TO CHECK THE STEREOCHEMICAL QUALITY OF PROTEIN STRUCTURES [J].
LASKOWSKI, RA ;
MACARTHUR, MW ;
MOSS, DS ;
THORNTON, JM .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1993, 26 :283-291
[14]  
Lindskog S, 2000, EXS, V90, P175
[15]   Structure and mechanism of carbonic anhydrase [J].
Lindskog, S .
PHARMACOLOGY & THERAPEUTICS, 1997, 74 (01) :1-20
[16]  
McPherson A., 1982, PREPARATION ANAL PRO
[17]   Production and X-ray crystallographic analysis of fully deuterated cytochrome P450cam [J].
Meilleur, F ;
Dauvergne, MT ;
Schlichting, I ;
Myles, DAA .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2005, 61 :539-544
[18]   Structural stability and dynamics of hydrogenated and perdeuterated cytochrome P450cam (CYP101) [J].
Meilleur, F ;
Contzen, J ;
Myles, DAA ;
Jung, C .
BIOCHEMISTRY, 2004, 43 (27) :8744-8753
[19]   Raster3D: Photorealistic molecular graphics [J].
Merritt, EA ;
Bacon, DJ .
MACROMOLECULAR CRYSTALLOGRAPHY, PT B, 1997, 277 :505-524
[20]   INSIGHTS INTO THE FUNCTION OF THE ZINC HYDROXIDE-THR199-GLU106 HYDROGEN-BONDING NETWORK IN CARBONIC-ANHYDRASES [J].
MERZ, KM .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 214 (04) :799-802