Binding of glucose to the D-galactose/D-glucose-binding protein from Escherichia coli restores the native protein secondary structure and thermostability that are lost upon calcium depletion
被引:22
作者:
D'Auria, S
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机构:CNR, Ist Biochim Prot, I-80131 Naples, Italy
D'Auria, S
Ausili, A
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机构:CNR, Ist Biochim Prot, I-80131 Naples, Italy
Ausili, A
Marabotti, A
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机构:CNR, Ist Biochim Prot, I-80131 Naples, Italy
Marabotti, A
Varriale, A
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机构:CNR, Ist Biochim Prot, I-80131 Naples, Italy
Varriale, A
Scognamiglio, V
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机构:CNR, Ist Biochim Prot, I-80131 Naples, Italy
Scognamiglio, V
Staiano, M
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机构:CNR, Ist Biochim Prot, I-80131 Naples, Italy
Staiano, M
Bertoli, E
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机构:CNR, Ist Biochim Prot, I-80131 Naples, Italy
Bertoli, E
Rossi, M
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机构:CNR, Ist Biochim Prot, I-80131 Naples, Italy
Rossi, M
Tanfani, F
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机构:CNR, Ist Biochim Prot, I-80131 Naples, Italy
Tanfani, F
机构:
[1] CNR, Ist Biochim Prot, I-80131 Naples, Italy
[2] Univ Politecn Marche, Ist Biochim, I-60131 Ancona, Italy
[3] CNR, Ist Sci Alimentaz, Lab Bioinformat, I-83100 Avellino, Italy
[4] Seconda Univ Napoli, CRISCEB, I-80138 Naples, Italy
galactose/glucose-binding protein;
infrared spectroscopy;
protein stability;
protein structure;
D O I:
10.1093/jb/mvj027
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
The effect of the depletion of calcium on the structure and thermal stability of the D-galactose/D-glucose-binding protein (GGBP) from Escherichia coli was studied by fluorescence spectroscopy and Fourier-transform infrared spectroscopy. The calcium-depleted protein (GGBP-Ca) was also studied in the presence of glucose (GGBP-Ca/Glc). The results show that calcium depletion has a small effect on the secondary structure of GGBP, and, in particular it affects a population of a-helices with a low exposure to solvent. Alternatively, glucose-binding to GGBP-Ca eliminates the effect induced by calcium depletion by restoring a secondary structure similar to that of the native protein. In addition, the infrared and fluorescence data obtained reveal that calcium depletion markedly reduces the thermal stability of GGBP. In particular, the spectroscopic experiments show that the depletion of calcium mainly affects the stability of the C-terminal domain of the protein. However, the binding of glucose restores the thermal stability of GGBP-Ca. The thermostability of GGBP and GGBP-Ca was also studied by molecular dynamics simulations. The simulation data support the spectroscopic results. New insights into the role of calcium in the thermal stability of GGBP contribute to a better understanding of the protein function and constitute important information for the development of biotechnological applications of this protein. Mutations and/or labelling of amino acid residues located in the protein C-terminal domain may affect the stability of the whole protein structure.