Human cytochromes P450 in the metabolism of drugs: new molecular models of enzyme-substrate interactions

被引:26
作者
Lewis, David F. V. [1 ]
Ito, Yuko [2 ]
机构
[1] Univ Surrey, Ctr Toxicol, Fac Med & Hlth Sci, Surrey GU2 7XH, England
[2] Yokohama City Univ, Grad Sch Integrated Sci, Div Sci Biol Supramol Syst, Tsurumi Ku, Kanagawa 2300045, Japan
关键词
cytochromes P450; drug metabolism; enzyme structures; molecular modelling;
D O I
10.1517/17425255.4.9.1181
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The overall predictive ability of molecular modelling, as applied to the cytochrome P450 (CYP) system, is analysed in the light of current developments in a variety of techniques, including X-ray crystallography, molecular biology, enzyme kinetics, molecular mechanics and dynamics, in relation to its relevance to drug metabolism in humans. This review demonstrates that it is possible to generate realistic models for the major human CYPs, which metabolise xenobiotics that compare favourably with crystal structures, and thus may be used to derive substrate binding energies that agree closely with experimental Km values obtained from enzyme kinetics.
引用
收藏
页码:1181 / 1186
页数:6
相关论文
共 48 条
[11]   Sequence diversity in CYP3A promoters and characterization of the genetic basis of polymorphic CYP3A5 expression [J].
Kuehl, P ;
Zhang, J ;
Lin, Y ;
Lamba, J ;
Assem, M ;
Schuetz, J ;
Watkins, PB ;
Daly, A ;
Wrighton, SA ;
Hall, SD ;
Maurel, P ;
Relling, M ;
Brimer, C ;
Yasuda, K ;
Venkataramanan, R ;
Strom, S ;
Thummel, K ;
Boguski, MS ;
Schuetz, E .
NATURE GENETICS, 2001, 27 (04) :383-391
[12]  
Lewis D F, 2001, ScientificWorldJournal, V1, P151
[13]  
Lewis D. F. V., 2002, Xenobiotica, V32, P305, DOI 10.1080/00498250110112015
[14]  
Lewis David F V, 2003, ScientificWorldJournal, V3, P536
[15]   Enzyme-substrate binding interaction energies and their application to the cytochrome P450 system [J].
Lewis, David F. V. ;
Ito, Yuko ;
Goldfarb, Peter S. .
CURRENT COMPUTER-AIDED DRUG DESIGN, 2008, 4 (02) :111-122
[16]  
Lewis David F V, 2004, ScientificWorldJournal, V4, P1074
[17]   Structural modelling of the human drug-metabolizing cytochromes P450 [J].
Lewis, David F. V. ;
Ito, Yuko ;
Goldfarb, Peter S. .
CURRENT MEDICINAL CHEMISTRY, 2006, 13 (22) :2645-2652
[18]   Investigating human p450s involved in drug metabolism via homology with high-resolution p450 crystal structures of the CYP2C subfamily [J].
Lewis, David F. V. ;
Ito, Yuko ;
Goldfarb, Peter S. .
CURRENT DRUG METABOLISM, 2006, 7 (06) :589-598
[19]   Cytochrome P450 structures and their substrate interactions [J].
Lewis, DFV ;
Ito, Y ;
Goldfarb, PS .
DRUG DEVELOPMENT RESEARCH, 2005, 66 (01) :19-24
[20]   Compound lipophilicity for substrate binding to human P450s in drug metabolism [J].
Lewis, DFV ;
Jacobs, MN ;
Dickins, M .
DRUG DISCOVERY TODAY, 2004, 9 (12) :530-537