The Bacterial Nanorecorder: Engineering E. coli to Function as a Chemical Recording Device

被引:6
作者
Bhomkar, Prasanna [1 ]
Materi, Wayne [1 ]
Wishart, David S. [1 ,2 ,3 ]
机构
[1] Natl Inst Nanotechnol, Edmonton, AB, Canada
[2] Univ Alberta, Dept Comp Sci, Edmonton, AB, Canada
[3] Univ Alberta, Dept Biol Sci, Edmonton, AB, Canada
来源
PLOS ONE | 2011年 / 6卷 / 11期
基金
加拿大健康研究院; 加拿大自然科学与工程研究理事会;
关键词
ESCHERICHIA-COLI; CELL-DIVISION; OPTIMIZATION; BISTABILITY; EXPRESSION; PLACEMENT; INHIBITOR; MINC; SITE;
D O I
10.1371/journal.pone.0027559
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Synthetic biology is an emerging branch of molecular biology that uses synthetic genetic constructs to create man-made cells or organisms that are capable of performing novel and/or useful applications. Using a synthetic chemically sensitive genetic toggle switch to activate appropriate fluorescent protein indicators (GFP, RFP) and a cell division inhibitor (minC), we have created a novel E. coli strain that can be used as a highly specific, yet simple and inexpensive chemical recording device. This biological "nanorecorder" can be used to determine both the type and the time at which a brief chemical exposure event has occurred. In particular, we show that the short-term exposure (15-30 min) of cells harboring this synthetic genetic circuit to small molecule signals (anhydrotetracycline or IPTG) triggered long-term and uniform cell elongation, with cell length being directly proportional to the time elapsed following a brief chemical exposure. This work demonstrates that facile modification of an existing genetic toggle switch can be exploited to generate a robust, biologically-based "nanorecorder" that could potentially be adapted to detect, respond and record a wide range of chemical stimuli that may vary over time and space.
引用
收藏
页数:10
相关论文
共 29 条
[1]   Environmentally controlled invasion of cancer cells by engineered bacteria [J].
Anderson, JC ;
Clarke, EJ ;
Arkin, AP ;
Voigt, CA .
JOURNAL OF MOLECULAR BIOLOGY, 2006, 355 (04) :619-627
[2]   Synthetic biology: new engineering rules for an emerging discipline [J].
Andrianantoandro, Ernesto ;
Basu, Subhayu ;
Karig, David K. ;
Weiss, Ron .
MOLECULAR SYSTEMS BIOLOGY, 2006, 2 (1) :2006.0028
[3]  
[Anonymous], 2012, Molecular Cloning: A Laboratory Manual
[4]   Inhibiting cell division in Escherichia coli has little if any effect on gene expression [J].
Arends, SJR ;
Weiss, DS .
JOURNAL OF BACTERIOLOGY, 2004, 186 (03) :880-884
[5]   CELL-DIVISION INHIBITORS SULA AND MINCD PREVENT FORMATION OF THE FTSZ RING [J].
BI, E ;
LUTKENHAUS, J .
JOURNAL OF BACTERIOLOGY, 1993, 175 (04) :1118-1125
[6]   Genetic control of mammalian T-cell proliferation with synthetic RNA regulatory systems [J].
Chen, Yvonne Y. ;
Jensen, Michael C. ;
Smolke, Christina D. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (19) :8531-8536
[7]   A synchronized quorum of genetic clocks [J].
Danino, Tal ;
Mondragon-Palomino, Octavio ;
Tsimring, Lev ;
Hasty, Jeff .
NATURE, 2010, 463 (7279) :326-330
[8]   A DIVISION INHIBITOR AND A TOPOLOGICAL SPECIFICITY FACTOR CODED FOR BY THE MINICELL LOCUS DETERMINE PROPER PLACEMENT OF THE DIVISION SEPTUM IN ESCHERICHIA-COLI [J].
DEBOER, PAJ ;
CROSSLEY, RE ;
ROTHFIELD, LI .
CELL, 1989, 56 (04) :641-649
[9]   CENTRAL ROLE FOR THE ESCHERICHIA-COLI MINC GENE-PRODUCT IN 2 DIFFERENT CELL DIVISION-INHIBITION SYSTEMS [J].
DEBOER, PAJ ;
CROSSLEY, RE ;
ROTHFIELD, LI .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1990, 87 (03) :1129-1133
[10]   ISOLATION AND PROPERTIES OF MINB, A COMPLEX GENETIC-LOCUS INVOLVED IN CORRECT PLACEMENT OF THE DIVISION SITE IN ESCHERICHIA-COLI [J].
DEBOER, PAJ ;
CROSSLEY, RE ;
ROTHFIELD, LI .
JOURNAL OF BACTERIOLOGY, 1988, 170 (05) :2106-2112