The LCB Data Warehouse

被引:35
作者
Ameur, A
Yankovski, V
Enroth, S
Spjuth, O
Komorowski, J [1 ]
机构
[1] Uppsala Univ, Linnaeus Ctr Bioinformat, Uppsala, Sweden
[2] Swedish Univ Agr Sci, S-75007 Uppsala, Sweden
[3] Uppsala Univ, Dept Pharmaceut Biosci, Uppsala, Sweden
关键词
D O I
10.1093/bioinformatics/btl036
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The Linnaeus Centre for Bioinformatics Data Warehouse (LCB-DWH) is a web-based infrastructure for reliable and secure microarray gene expression data management and analysis that provides an online service for the scientific community. The LCB-DWH is an effort towards a complete system for storage (using the BASE system), analysis and publication of microarray data. Important features of the system include: access to established methods within R/Bioconductor for data analysis, built-in connection to the Gene Ontology database and a scripting facility for automatic recording and re-play of all the steps of the analysis. The service is up and running on a high performance server. At present there are more than 150 registered users.
引用
收藏
页码:1024 / 1026
页数:3
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