Estrogen-induced upregulation and 3′-UTR shortening of CDC6

被引:75
作者
Akman, Begum H. [1 ]
Can, Tolga [2 ]
Erson-Bensan, A. Elif [1 ]
机构
[1] METU Middle E Tech Univ, Dept Biol Sci, TR-06800 Ankara, Turkey
[2] METU Middle E Tech Univ, Dept Comp Engn, TR-06800 Ankara, Turkey
关键词
BREAST-CANCER CELLS; ALTERNATIVE POLYADENYLATION; DNA-REPLICATION; GENE; EXPRESSION; IDENTIFICATION; TRANSCRIPTION; COMPLEXES; DATABASE; GROWTH;
D O I
10.1093/nar/gks855
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
3'-Untranslated region (UTR) shortening of mRNAs via alternative polyadenylation (APA) has important ramifications for gene expression. By using proximal APA sites and switching to shorter 3'-UTRs, proliferating cells avoid miRNA-mediated repression. Such APA and 3'-UTR shortening events may explain the basis of some of the proto-oncogene activation cases observed in cancer cells. In this study, we investigated whether 17 beta-estradiol (E2), a potent proliferation signal, induces APA and 3'-UTR shortening to activate proto-oncogenes in estrogen receptor positive (ER+) breast cancers. Our initial probe based screen of independent expression arrays suggested upregulation and 3'-UTR shortening of an essential regulator of DNA replication, CDC6 (cell division cycle 6), upon E2 treatment. We further confirmed the E2- and ER-dependent upregulation and 3'UTR shortening of CDC6, which lead to increased CDC6 protein levels and higher BrdU incorporation. Consequently, miRNA binding predictions and dual luciferase assays suggested that 3'-UTR shortening of CDC6 was a mechanism to avoid 3'-UTR-dependent negative regulations. Hence, we demonstrated CDC6 APA induction by the proliferative effect of E2 in ER+ cells and provided new insights into the complex regulation of APA. E2-induced APA is likely to be an important but previously overlooked mechanism of E2-responsive gene expression.
引用
收藏
页码:10679 / 10688
页数:10
相关论文
共 49 条
[1]
USP32 is an active, membrane-bound ubiquitin protease overexpressed in breast cancers [J].
Akhavantabasi, Shiva ;
Akman, Hesna B. ;
Sapmaz, Aysegul ;
Keller, Jennifer ;
Petty, Elizabeth M. ;
Erson, Ayse E. .
MAMMALIAN GENOME, 2010, 21 (7-8) :388-397
[2]
Endocrine-responsive breast cancer and strategies for combating resistance [J].
Ali, S ;
Coombes, RC .
NATURE REVIEWS CANCER, 2002, 2 (02) :101-+
[3]
Unliganded estrogen receptor-α activates transcription of the mammary gland Na+/I- symporter gene [J].
Alotaibi, Hani ;
Yaman, Ellf Cankaya ;
Demirpence, Ediz ;
Tazebay, Uygar H. .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2006, 345 (04) :1487-1496
[4]
Conservation of alternative polyadenylation patterns in mammalian genes [J].
Ara, Takeshi ;
Lopez, Fabrice ;
Ritchie, William ;
Benech, Philippe ;
Gautheret, Daniel .
BMC GENOMICS, 2006, 7 (1)
[5]
NCBI GEO: archive for functional genomics data sets-10 years on [J].
Barrett, Tanya ;
Troup, Dennis B. ;
Wilhite, Stephen E. ;
Ledoux, Pierre ;
Evangelista, Carlos ;
Kim, Irene F. ;
Tomashevsky, Maxim ;
Marshall, Kimberly A. ;
Phillippy, Katherine H. ;
Sherman, Patti M. ;
Muertter, Rolf N. ;
Holko, Michelle ;
Ayanbule, Oluwabukunmi ;
Yefanov, Andrey ;
Soboleva, Alexandra .
NUCLEIC ACIDS RESEARCH, 2011, 39 :D1005-D1010
[6]
CDC6:: from DNA replication to cell cycle checkpoints and oncogenesis [J].
Borlado, Luis R. ;
Mendez, Juan .
CARCINOGENESIS, 2008, 29 (02) :237-243
[7]
Mechanisms of primary and secondary estrogen target gene regulation in breast cancer cells [J].
Bourdeau, Veronique ;
Deschenes, Julie ;
Laperriere, David ;
Aid, Malika ;
White, John H. ;
Mader, Sylvie .
NUCLEIC ACIDS RESEARCH, 2008, 36 (01) :76-93
[8]
The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments [J].
Bustin, Stephen A. ;
Benes, Vladimir ;
Garson, Jeremy A. ;
Hellemans, Jan ;
Huggett, Jim ;
Kubista, Mikael ;
Mueller, Reinhold ;
Nolan, Tania ;
Pfaffl, Michael W. ;
Shipley, Gregory L. ;
Vandesompele, Jo ;
Wittwer, Carl T. .
CLINICAL CHEMISTRY, 2009, 55 (04) :611-622
[9]
Genome-wide analysis of estrogen receptor binding sites [J].
Carroll, Jason S. ;
Meyer, Clifford A. ;
Song, Jun ;
Li, Wei ;
Geistlinger, Timothy R. ;
Eeckhoute, Jerome ;
Brodsky, Alexander S. ;
Keeton, Erika Krasnickas ;
Fertuck, Kirsten C. ;
Hall, Giles F. ;
Wang, Qianben ;
Bekiranov, Stefan ;
Sementchenko, Victor ;
Fox, Edward A. ;
Silver, Pamela A. ;
Gingeras, Thomas R. ;
Liu, X. Shirley ;
Brown, Myles .
NATURE GENETICS, 2006, 38 (11) :1289-1297
[10]
An essential role for the Cdc6 protein in forming the pre-replicative complexes of budding yeast [J].
Cocker, JH ;
Piatti, S ;
Santocanale, C ;
Nasmyth, K ;
Diffley, JFX .
NATURE, 1996, 379 (6561) :180-182