Ecological perspectives on the sequenced genome collection

被引:21
作者
Martiny, JBH
Field, D
机构
[1] Oxford Ctr Ecol & Hydrol, Mol Evolut & Bioinformat Sect, Oxford OX1 3SR, England
[2] Brown Univ, Dept Ecol & Evolutionary Biol, Providence, RI 02912 USA
基金
英国自然环境研究理事会;
关键词
bioinformatics; comparative method; extremophiles; genome architecture; genomics; host-parasite interactions; metadata; procaryotes; species interactions; viruses;
D O I
10.1111/j.1461-0248.2005.00837.x
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Our complete genome collection is one of our most valuable biological resources. A key challenge for the future is the interpretation of these genomes from an ecological perspective. In this review, we discuss current work at this increasingly important interface. In particular, we review ongoing work aimed at developing high quality data sets that combine ecological, environmental, evolutionary and genomic information. Such data will help to identify biases in the sequence collection and facilitate future discoveries about the nature of ecological adaptation at the genome level. These efforts will be greatly enhanced by the contributions of ecologists.
引用
收藏
页码:1334 / 1345
页数:12
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