Salinispora pacifica sp nov., an actinomycete from marine sediments

被引：37

作者：

Ahmed, Lina ^{[1
]}

Jensen, Paul R. ^{[2
]}

Freel, Kelle C. ^{[2
]}

Brown, Ros ^{[1
]}

Jones, Amanda L. ^{[1
]}

Kim, Byung-Yong ^{[3
]}

Goodfellow, Michael ^{[1
]}

机构：

[1] Newcastle Univ, Sch Biol, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England

[2] Univ Calif San Diego, Scripps Inst Oceanog, Ctr Marine Biotechnol & Biomed, La Jolla, CA 92093 USA

[3] Rural Dev Adm, Dept Agr Microbiol, Natl Acad Agr Sci, Suwon 441707, South Korea

来源：

ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY | 2013年 / 103卷 / 05期

基金：

美国国家卫生研究院;

关键词：

Salinispora pacifica sp nov; Polyphasic taxonomy; Obligate marine actinomycete; Marine sediments; Fiji; GEN; NOV; DIVERSITY; EXTRACTION;

D O I：

10.1007/s10482-013-9886-4

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

A polyphasic analysis was carried out to clarify the taxonomic status of four marine actinomycete strains that share a phylogenetic relationship and phenotypic characteristics with the genus Salinispora. These strains formed a distinct lineage within the Salinispora 16S rRNA and gyrB trees and were found to possess a range of phenotypic properties and DNA: DNA hybridization values that distinguished them from the type strains of the two validly named species in this genus, Salinispora tropica (CNB-440(T), ATCC BAA-916(T)) and Salinispora arenicola (CNH-643(T), ATCC BAA-917(T)). The combined genotypic and phenotypic data support this conclusion. It is proposed that the strains be designated as Salinispora pacifica sp. nov., the type strain of which is CNR-114(T) (DSMZ YYYYT = KACC 17160(T)).

引用

页码：1069 / 1078

页数：10

共 41 条

[1]

[Anonymous], 1990, Technical Note 101

[2]

Becerril-Espinosa A, 2012, A VANLEEUWENHOE 1211

[3]

Collins MD, 1994, Chemical Methods in Prokaryotic Systematics, P265

[4] EVOLUTIONARY TREES FROM DNA-SEQUENCES - A MAXIMUM-LIKELIHOOD APPROACH [J].

FELSENSTEIN, J .

JOURNAL OF MOLECULAR EVOLUTION, 1981, 17 (06) :368-376

[5] Developing a new resource for drug discovery: marine actinomycete bacteria [J].

Fenical, William ;

Jensen, Paul R. .

NATURE CHEMICAL BIOLOGY, 2006, 2 (12) :666-673

[6] Discovery and development of the anticancer agent salinosporamide A (NPI-0052) [J].

Fenical, William ;

Jensen, Paul R. ;

Palladino, Michael A. ;

Lam, Kin S. ;

Lloyd, G. Kenneth ;

Potts, Barbara C. .

BIOORGANIC & MEDICINAL CHEMISTRY, 2009, 17 (06) :2175-2180

[7] Microdiversity and evidence for high dispersal rates in the marine actinomycete 'Salinispora pacifica' [J].

Freel, Kelle C. ;

Edlund, Anna ;

Jensen, Paul R. .

ENVIRONMENTAL MICROBIOLOGY, 2012, 14 (02) :480-493

[8] Phylogenetic diversity of gram-positive bacteria cultured from marine sediments [J].

Gontang, Erin A. ;

Fenical, William ;

Jensen, Paul R. .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2007, 73 (10) :3272-3282

[9] IDENTIFICATION OF NOCARDIA CAVIAE (ERIKSON) NOV. COMB [J].

GORDON, RE ;

MIHM, JM .

ANNALS OF THE NEW YORK ACADEMY OF SCIENCES, 1962, 98 (03) :628-&

[10] Salinibacterium amurskyense gen. nov., sp nov., a novel genus of the family Microbacteriaceae from the marine environment [J].

Han, SK ;

Nedashkovskaya, OI ;

Mikhailov, VV ;

Kim, SB ;

Bae, KS .

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2003, 53 :2061-2066

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