Taking the Next Step: Building an Arabidopsis Information Portal

被引:24
作者
Baerenfaller, Katja [1 ]
Bastow, Ruth
Beynon, James [2 ]
Brady, Siobhan [3 ]
Brendel, Volker [4 ]
Donaldson, Sylva [5 ]
Dooley, Rion [6 ]
Forster, Mark
Friesner, Joanna
Gifford, David [7 ]
Grotewold, Erich [8 ]
Gutierrez, Rodrigo [9 ]
Huala, Eva
Jaiswal, Pankaj
Joshi, Hiren [10 ]
Kersey, Paul
Liu, Lei [11 ]
Loraine, Ann [12 ]
Lyons, Eric [13 ]
May, Sean [14 ,15 ]
Mayer, Klaus [16 ]
MacLean, Dan
Meyers, Blake [17 ]
Mueller, Lukas [18 ]
Muller, Robert
Muller, Hans-Michael [19 ]
Ouellette, Francis [20 ]
Pires, J. Chris [21 ]
Provart, Nicholas [5 ]
Staiger, Dorothee [22 ]
Stanzione, Dan [6 ]
Taylor, James [23 ]
Taylor, Crispin
Town, Chris
Toyoda, Tetsuro [7 ]
Vaughn, Matt [6 ]
Walsh, Sean [1 ]
Ware, Doreen [24 ]
Weckwerth, Wolfram [25 ]
机构
[1] ETH, Zurich, Switzerland
[2] Univ Warwick, Coventry CV4 7AL, W Midlands, England
[3] Univ Calif Davis, Davis, CA 95616 USA
[4] Iowa State Univ, Ames, IA 50011 USA
[5] Univ Toronto, Toronto, ON M5S 1A1, Canada
[6] Univ Texas Austin, Austin, TX 78712 USA
[7] RIKEN, Wako, Saitama, Japan
[8] Ohio State Univ, ABRC, Columbus, OH 43210 USA
[9] Pontificia Univ Catolica Chile, Santiago, Chile
[10] Lawrence Berkeley Natl Lab, Joint BioEnergy Inst, Berkeley, CA USA
[11] Chinese Acad Sci, Shanghai Inst Biol Sci, Beijing 100864, Peoples R China
[12] Univ N Carolina, Charlotte, NC 28223 USA
[13] Univ Arizona, Tucson, AZ 85721 USA
[14] Univ Nottingham, Nottingham NG7 2RD, England
[15] Nottingham Arabidopsis Stock Ctr, Nottingham, England
[16] Inst Bioinformat & Syst Biol, Munich Informat Ctr Prot Sequences, Munich, Germany
[17] Univ Delaware, Newark, DE 19716 USA
[18] Cornell Univ, Ithaca, NY 14853 USA
[19] CALTECH, Pasadena, CA 91125 USA
[20] Ontario Inst Canc Res, Toronto, ON, Canada
[21] Univ Missouri Columbia, Columbia, MO USA
[22] Univ Bielefeld, Bielefeld, Germany
[23] Emory Univ, Atlanta, GA 30322 USA
[24] Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
[25] Univ Vienna, A-1010 Vienna, Austria
基金
英国生物技术与生命科学研究理事会; 美国国家科学基金会;
关键词
BIOLOGICAL DATA; DATABASE; BROWSER; VISUALIZATION; INTERACTOME; ANNOTATION; SOFTWARE; RESOURCE; FEATURES; PLATFORM;
D O I
10.1105/tpc.112.100669
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Arabidopsis Information Portal (AIP), a resource expected to provide access to all community data and combine outputs into a single user-friendly interface, has emerged from community discussions over the last 23 months. These discussions began during two closely linked workshops in early 2010 that established the International Arabidopsis Informatics Consortium (IAIC). The design of the AIP will provide core functionality while remaining flexible to encourage multiple contributors and constant innovation. An IAIC-hosted Design Workshop in December 2011 proposed a structure for the AIP to provide a framework for the minimal components of a functional community portal while retaining flexibility to rapidly extend the resource to other species. We now invite broader participation in the AIP development process so that the resource can be implemented in a timely manner.
引用
收藏
页码:2248 / 2256
页数:9
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