A critical role for AID in the initiation of reprogramming to induced pluripotent stem cells

被引:26
作者
Bhutani, Nidhi [1 ]
Decker, Matthew N. [1 ]
Brady, Jennifer J. [1 ]
Bussat, Rose T. [1 ]
Burns, David M. [1 ]
Corbel, Stephane Y. [1 ]
Blau, Helen M. [1 ]
机构
[1] Stanford Univ, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med, Dept Microbiol & Immunol,Sch Med, Stanford, CA 94305 USA
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
activation-induced deaminase; DNA demethylation; early events in iPSC generation; ACTIVE DNA DEMETHYLATION; TET PROTEINS; 5-METHYLCYTOSINE; STATE; 5-HYDROXYMETHYLCYTOSINE; FIBROBLASTS; EXPRESSION; GENERATION; CONVERSION;
D O I
10.1096/fj.12-222125
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
Mechanistic insights into the reprogramming of fibroblasts to induced pluripotent stem cells (iPSCs) are limited, particularly for early acting molecular regulators. Here we use an acute loss of function approach to demonstrate that activation-induced deaminase (AID) activity is necessary for the initiation of reprogramming to iPSCs. While AID is well known for antibody diversification, it has also recently been shown to have a role in active DNA demethylation in reprogramming toward pluripotency and development. These findings suggested a potential role for AID in iPSC generation, yet, iPSC yield from AID-knockout mouse fibroblasts was similar to that of wild-type (WT) fibroblasts. We reasoned that an acute loss of AID function might reveal effects masked by compensatory mechanisms during development, as reported for other proteins. Accordingly, we induced an acute reduction (> 50%) in AID levels using 4 different shRNAs and determined that reprogramming to iPSCs was significantly impaired by 79 +/- 7%. The deaminase activity of AID was critical, as coexpression of WT but not a catalytic mutant AID rescued reprogramming. Notably, AID was required only during a 72-h time window at the onset of iPSC reprogramming. Our findings show a critical role for AID activity in the initiation of reprogramming to iPSCs.-Bhutani, N., Decker, M. N., Brady, J. J., Bussat, R. T., Burns, D. M., Corbel, S. Y., Blau, H. M. A critical role for AID in the initiation of reprogramming to induced pluripotent stem cells. FASEB J. 27, 1107-1113 (2013). www.fasebj.org
引用
收藏
页码:1107 / 1113
页数:7
相关论文
共 33 条
[1]
Cdk1: the dominant sibling of Cdk2 [J].
Bashir, T ;
Pagano, M .
NATURE CELL BIOLOGY, 2005, 7 (08) :779-781
[2]
DNA Demethylation Dynamics [J].
Bhutani, Nidhi ;
Burns, David M. ;
Blau, Helen M. .
CELL, 2011, 146 (06) :866-872
[3]
Reprogramming towards pluripotency requires AID-dependent DNA demethylation [J].
Bhutani, Nidhi ;
Brady, Jennifer J. ;
Damian, Mara ;
Sacco, Alessandra ;
Corbel, Stephane Y. ;
Blau, Helen M. .
NATURE, 2010, 463 (7284) :1042-U57
[4]
PLASTICITY OF THE DIFFERENTIATED STATE [J].
BLAU, HM ;
PAVLATH, GK ;
HARDEMAN, EC ;
CHIU, CP ;
SILBERSTEIN, L ;
WEBSTER, SG ;
MILLER, SC ;
WEBSTER, C .
SCIENCE, 1985, 230 (4727) :758-766
[5]
Uncovering the role of 5-hydroxymethylcytosine in the epigenome [J].
Branco, Miguel R. ;
Ficz, Gabriella ;
Reik, Wolf .
NATURE REVIEWS GENETICS, 2012, 13 (01) :7-13
[6]
Single-Cell Expression Analyses during Cellular Reprogramming Reveal an Early Stochastic and a Late Hierarchic Phase [J].
Buganim, Yosef ;
Faddah, Dina A. ;
Cheng, Albert W. ;
Itskovich, Elena ;
Markoulaki, Styliani ;
Ganz, Kibibi ;
Klemm, Sandy L. ;
van Oudenaarden, Alexander ;
Jaenisch, Rudolf .
CELL, 2012, 150 (06) :1209-1222
[7]
The AID/APOBEC family of nucleic acid mutators [J].
Conticello, Silvestro G. .
GENOME BIOLOGY, 2008, 9 (06)
[8]
Thymine DNA Glycosylase Is Essential for Active DNA Demethylation by Linked Deamination-Base Excision Repair [J].
Cortellino, Salvatore ;
Xu, Jinfei ;
Sannai, Mara ;
Moore, Robert ;
Caretti, Elena ;
Cigliano, Antonio ;
Le Coz, Madeleine ;
Devarajan, Karthik ;
Wessels, Andy ;
Soprano, Dianne ;
Abramowitz, Lara K. ;
Bartolomei, Marisa S. ;
Rambow, Florian ;
Bassi, Maria Rosaria ;
Bruno, Tiziana ;
Fanciulli, Maurizio ;
Renner, Catherine ;
Klein-Szanto, Andres J. ;
Matsumoto, Yoshihiro ;
Kobi, Dominique ;
Davidson, Irwin ;
Alberti, Christophe ;
Larue, Lionel ;
Bellacosa, Alfonso .
CELL, 2011, 146 (01) :67-79
[9]
Hydroxylation of 5-Methylcytosine by TET1 Promotes Active DNA Demethylation in the Adult Brain [J].
Guo, Junjie U. ;
Su, Yijing ;
Zhong, Chun ;
Ming, Guo-li ;
Song, Hongjun .
CELL, 2011, 145 (03) :423-434
[10]
Suppression of induced pluripotent stem cell generation by the p53-p21 pathway [J].
Hong, Hyenjong ;
Takahashi, Kazutoshi ;
Ichisaka, Tomoko ;
Aoi, Takashi ;
Kanagawa, Osami ;
Nakagawa, Masato ;
Okita, Keisuke ;
Yamanaka, Shinya .
NATURE, 2009, 460 (7259) :1132-1135