共 52 条
Tandem mass spectrometry for measuring stable-isotope labeling
被引:47
作者:

Antoniewicz, Maciek R.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Delaware, Dept Chem & Biomol Engn, Metab Engn & Syst Biol Lab, Newark, DE 19716 USA Univ Delaware, Dept Chem & Biomol Engn, Metab Engn & Syst Biol Lab, Newark, DE 19716 USA
机构:
[1] Univ Delaware, Dept Chem & Biomol Engn, Metab Engn & Syst Biol Lab, Newark, DE 19716 USA
基金:
美国国家科学基金会;
关键词:
METABOLIC FLUX ANALYSIS;
ION CHROMATOGRAPHY;
AMINO-ACIDS;
ELECTROSPRAY-IONIZATION;
SYSTEMS BIOLOGY;
UNITS EMU;
COLI;
DISTRIBUTIONS;
ELUCIDATION;
PERFORMANCE;
D O I:
10.1016/j.copbio.2012.10.011
中图分类号:
Q5 [生物化学];
学科分类号:
071010 ;
081704 ;
摘要:
Measuring metabolic rates by C-13-metabolic flux analysis (C-13-MFA) is of central importance for metabolic engineers and biomedical investigators. Enhanced knowledge of in vivo fluxes can be applied to reengineer the metabolic, regulatory, and phenotypic characteristics of organisms and help uncover the mechanisms of human ailments such as cancer and diabetes. To determine accurate and precise fluxes by C-13-MFA advanced methods for measuring stable-isotope labeling are needed. The application of tandem mass spectrometry is emerging as a new promising technique that has significant advantages over traditional MS and NMR based methods. With further refinement, tandem MS has the potential to become the new gold standard for measuring isotopic labeling for C-13-flux studies.
引用
收藏
页码:48 / 53
页数:6
相关论文
共 52 条
[1]
Towards dynamic metabolic flux analysis in CHO cell cultures
[J].
Ahn, Woo Suk
;
Antoniewicz, Maciek R.
.
BIOTECHNOLOGY JOURNAL,
2012, 7 (01)
:61-74

Ahn, Woo Suk
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Delaware, Dept Chem Engn, Metab Engn & Syst Biol Lab, Newark, DE 19716 USA Univ Delaware, Dept Chem Engn, Metab Engn & Syst Biol Lab, Newark, DE 19716 USA

Antoniewicz, Maciek R.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Delaware, Dept Chem Engn, Metab Engn & Syst Biol Lab, Newark, DE 19716 USA Univ Delaware, Dept Chem Engn, Metab Engn & Syst Biol Lab, Newark, DE 19716 USA
[2]
Metabolic flux analysis of CHO cells at growth and non-growth phases using isotopic tracers and mass spectrometry
[J].
Ahn, Woo Suk
;
Antoniewicz, Maciek R.
.
METABOLIC ENGINEERING,
2011, 13 (05)
:598-609

Ahn, Woo Suk
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Delaware, Dept Chem Engn, Metab Engn & Syst Biol Lab, Newark, DE 19716 USA Univ Delaware, Dept Chem Engn, Metab Engn & Syst Biol Lab, Newark, DE 19716 USA

Antoniewicz, Maciek R.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Delaware, Dept Chem Engn, Metab Engn & Syst Biol Lab, Newark, DE 19716 USA Univ Delaware, Dept Chem Engn, Metab Engn & Syst Biol Lab, Newark, DE 19716 USA
[3]
Quantifying the Labeling and the Levels of Plant Cell Wall Precursors Using Ion Chromatography Tandem Mass Spectrometry
[J].
Alonso, Ana P.
;
Piasecki, Rebecca J.
;
Wang, Yan
;
LaClair, Russell W.
;
Shachar-Hill, Yair
.
PLANT PHYSIOLOGY,
2010, 153 (03)
:915-924

Alonso, Ana P.
论文数: 0 引用数: 0
h-index: 0
机构:
Great Lakes Bioenergy Res Ctr, E Lansing, MI 48824 USA
Michigan State Univ, Dept Plant Biol, E Lansing, MI 48824 USA Great Lakes Bioenergy Res Ctr, E Lansing, MI 48824 USA

Piasecki, Rebecca J.
论文数: 0 引用数: 0
h-index: 0
机构:
Great Lakes Bioenergy Res Ctr, E Lansing, MI 48824 USA
Michigan State Univ, Dept Plant Biol, E Lansing, MI 48824 USA Great Lakes Bioenergy Res Ctr, E Lansing, MI 48824 USA

Wang, Yan
论文数: 0 引用数: 0
h-index: 0
机构:
Great Lakes Bioenergy Res Ctr, E Lansing, MI 48824 USA Great Lakes Bioenergy Res Ctr, E Lansing, MI 48824 USA

LaClair, Russell W.
论文数: 0 引用数: 0
h-index: 0
机构:
Great Lakes Bioenergy Res Ctr, E Lansing, MI 48824 USA
Michigan State Univ, Dept Plant Biol, E Lansing, MI 48824 USA Great Lakes Bioenergy Res Ctr, E Lansing, MI 48824 USA

Shachar-Hill, Yair
论文数: 0 引用数: 0
h-index: 0
机构:
Great Lakes Bioenergy Res Ctr, E Lansing, MI 48824 USA
Michigan State Univ, Dept Plant Biol, E Lansing, MI 48824 USA Great Lakes Bioenergy Res Ctr, E Lansing, MI 48824 USA
[4]
Accurate assessment of amino acid mass isotopomer distributions for metabolic flux analysis
[J].
Antoniewicz, Maciek R.
;
Kelleher, Joanne K.
;
Stephanopoulos, Gregory
.
ANALYTICAL CHEMISTRY,
2007, 79 (19)
:7554-7559

Antoniewicz, Maciek R.
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Chem Engn Bioinformat, Cambridge, MA 02139 USA

Kelleher, Joanne K.
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Chem Engn Bioinformat, Cambridge, MA 02139 USA

Stephanopoulos, Gregory
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Chem Engn Bioinformat, Cambridge, MA 02139 USA
[5]
Metabolic flux analysis in a nonstationary system:: Fed-batch fermentation of a high yielding strain of E. coli producing 1,3-propanediol
[J].
Antoniewicz, Maciek R.
;
Kraynie, David F.
;
Laffend, Lisa A.
;
Gonzalez-Lergier, Joanna
;
Kelleher, Joanne K.
;
Stephanopoulos, Gregory
.
METABOLIC ENGINEERING,
2007, 9 (03)
:277-292

Antoniewicz, Maciek R.
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA

Kraynie, David F.
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA

Laffend, Lisa A.
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA

Gonzalez-Lergier, Joanna
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA

Kelleher, Joanne K.
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA

Stephanopoulos, Gregory
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA
[6]
Elementary metabolite units (EMU): A novel framework for modeling isotopic distributions
[J].
Antoniewicz, Maciek R.
;
Kelleher, Joanne K.
;
Stephanopoulos, Gregory
.
METABOLIC ENGINEERING,
2007, 9 (01)
:68-86

Antoniewicz, Maciek R.
论文数: 0 引用数: 0
h-index: 0
机构:
MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA

Kelleher, Joanne K.
论文数: 0 引用数: 0
h-index: 0
机构:
MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA

Stephanopoulos, Gregory
论文数: 0 引用数: 0
h-index: 0
机构:
MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA
[7]
Determination of confidence intervals of metabolic fluxes estimated from stable isotope measurements
[J].
Antoniewicz, Maciek R.
;
Kelleher, Joanne K.
;
Stephanopoulos, Gregory
.
METABOLIC ENGINEERING,
2006, 8 (04)
:324-337

Antoniewicz, Maciek R.
论文数: 0 引用数: 0
h-index: 0
机构:
MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA

Kelleher, Joanne K.
论文数: 0 引用数: 0
h-index: 0
机构:
MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA

Stephanopoulos, Gregory
论文数: 0 引用数: 0
h-index: 0
机构:
MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA
[8]
Measuring Deuterium Enrichment of Glucose Hydrogen Atoms by Gas Chromatography/Mass Spectrometry
[J].
Antoniewicz, Maciek R.
;
Kelleher, Joanne K.
;
Stephanopoulos, Gregory
.
ANALYTICAL CHEMISTRY,
2011, 83 (08)
:3211-3216

Antoniewicz, Maciek R.
论文数: 0 引用数: 0
h-index: 0
机构:
MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA

Kelleher, Joanne K.
论文数: 0 引用数: 0
h-index: 0
机构:
MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA

Stephanopoulos, Gregory
论文数: 0 引用数: 0
h-index: 0
机构:
MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA MIT, Dept Chem Engn, Bioinformat & Metab Engn Lab, Cambridge, MA 02139 USA
[9]
Separation and quantitation of water soluble cellular metabolites by hydrophilic interaction chromatography-tandem mass spectrometry
[J].
Bajad, Sunil U.
;
Lu, Wenyun
;
Kimball, Elizabeth H.
;
Yuan, Jie
;
Peterson, Celeste
;
Rabinowitz, Joshua D.
.
JOURNAL OF CHROMATOGRAPHY A,
2006, 1125 (01)
:76-88

Bajad, Sunil U.
论文数: 0 引用数: 0
h-index: 0
机构: Princeton Univ, Lewis Sigler Inst Integrat Genom, Princeton, NJ 08544 USA

Lu, Wenyun
论文数: 0 引用数: 0
h-index: 0
机构: Princeton Univ, Lewis Sigler Inst Integrat Genom, Princeton, NJ 08544 USA

Kimball, Elizabeth H.
论文数: 0 引用数: 0
h-index: 0
机构: Princeton Univ, Lewis Sigler Inst Integrat Genom, Princeton, NJ 08544 USA

Yuan, Jie
论文数: 0 引用数: 0
h-index: 0
机构: Princeton Univ, Lewis Sigler Inst Integrat Genom, Princeton, NJ 08544 USA

Peterson, Celeste
论文数: 0 引用数: 0
h-index: 0
机构: Princeton Univ, Lewis Sigler Inst Integrat Genom, Princeton, NJ 08544 USA

Rabinowitz, Joshua D.
论文数: 0 引用数: 0
h-index: 0
机构:
Princeton Univ, Lewis Sigler Inst Integrat Genom, Princeton, NJ 08544 USA Princeton Univ, Lewis Sigler Inst Integrat Genom, Princeton, NJ 08544 USA
[10]
Ultrahigh Performance Liquid Chromatography-Tandem Mass Spectrometry Method for Fast and Robust Quantification of Anionic and Aromatic Metabolites
[J].
Buescher, Joerg Martin
;
Moco, Sofia
;
Sauer, Uwe
;
Zamboni, Nicola
.
ANALYTICAL CHEMISTRY,
2010, 82 (11)
:4403-4412

Buescher, Joerg Martin
论文数: 0 引用数: 0
h-index: 0
机构:
Swiss Fed Inst Technol, Inst Mol Syst Biol, Zurich, Switzerland Swiss Fed Inst Technol, Inst Mol Syst Biol, Zurich, Switzerland

Moco, Sofia
论文数: 0 引用数: 0
h-index: 0
机构:
Swiss Fed Inst Technol, Inst Mol Syst Biol, Zurich, Switzerland Swiss Fed Inst Technol, Inst Mol Syst Biol, Zurich, Switzerland

Sauer, Uwe
论文数: 0 引用数: 0
h-index: 0
机构:
Swiss Fed Inst Technol, Inst Mol Syst Biol, Zurich, Switzerland Swiss Fed Inst Technol, Inst Mol Syst Biol, Zurich, Switzerland

Zamboni, Nicola
论文数: 0 引用数: 0
h-index: 0
机构:
Swiss Fed Inst Technol, Inst Mol Syst Biol, Zurich, Switzerland Swiss Fed Inst Technol, Inst Mol Syst Biol, Zurich, Switzerland