We have developed a new method (BioHMM) for segmenting array comparative genomic hybridization data into states with the same underlying copy number. By utilizing a heterogeneous hidden Markov model, BioHMM incorporates relevant biological factors (e.g. the distance between adjacent clones) in the segmentation process.
机构:
Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Fridlyand, J
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Snijders, AM
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机构:
Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Snijders, AM
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Pinkel, D
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Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Pinkel, D
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Albertson, DG
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机构:
Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Albertson, DG
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Jain, AN
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Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Snijders, AM
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Nowak, N
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Nowak, N
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Segraves, R
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Segraves, R
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Blackwood, S
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Blackwood, S
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Brown, N
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Brown, N
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Conroy, J
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Conroy, J
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Hamilton, G
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Hamilton, G
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Hindle, AK
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Hindle, AK
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Huey, B
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Huey, B
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Kimura, K
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Kimura, K
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Law, S
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Law, S
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Myambo, K
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Myambo, K
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Palmer, J
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Palmer, J
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Ylstra, B
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Ylstra, B
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Yue, JP
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Yue, JP
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Gray, JW
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Gray, JW
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Jain, AN
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Jain, AN
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Pinkel, D
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机构:
Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
机构:
Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Fridlyand, J
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Snijders, AM
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Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Snijders, AM
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Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Pinkel, D
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Albertson, DG
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Jain, AN
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Snijders, AM
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Nowak, N
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
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Blackwood, S
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Brown, N
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Conroy, J
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Hamilton, G
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Hindle, AK
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Huey, B
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Huey, B
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Kimura, K
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Kimura, K
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Law, S
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Law, S
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Myambo, K
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Myambo, K
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Palmer, J
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Palmer, J
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Ylstra, B
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Ylstra, B
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Yue, JP
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Yue, JP
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Gray, JW
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Gray, JW
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Jain, AN
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Jain, AN
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机构:Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA
Pinkel, D
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机构:
Univ Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Comprehens Canc, San Francisco, CA 94143 USA