A trait-based approach for modelling microbial litter decomposition

被引:279
作者
Allison, S. D. [1 ]
机构
[1] Univ Calif Irvine, Dept Earth Syst Sci, Dept Ecol & Evolutionary Biol, Irvine, CA 92697 USA
基金
美国国家科学基金会;
关键词
Community composition; diversity; extracellular enzyme; functional group; litter decomposition; microbe; model; spatial structure; trade-off; trait; N-P STOICHIOMETRY; CARBON-CYCLE; EXTRACELLULAR PROTEASE; ANTIBIOTIC PRODUCTION; NITROGEN DEPOSITION; VEGETATION DYNAMICS; COMMUNITY ECOLOGY; THEORETICAL-MODEL; ENZYME-ACTIVITIES; PLANT DIVERSITY;
D O I
10.1111/j.1461-0248.2012.01807.x
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Trait-based models are an emerging tool in ecology with the potential to link community dynamics, environmental responses and ecosystem processes. These models represent complex communities by defining taxa with trait combinations derived from prior distributions that may be constrained by trade-offs. Herein I develop a model that links microbial community composition with physiological and enzymatic traits to predict litter decomposition rates. This approach allows for trade-offs among traits that represent alternative microbial strategies for resource acquisition. The model predicts that optimal strategies depend on the level of enzyme production in the whole community, which determines resource availability and decomposition rates. There is also evidence for facilitation and competition among microbial taxa that co-occur on decomposing litter. These interactions vary with community investment in extracellular enzyme production and the magnitude of trade-offs affecting enzyme biochemical traits. The model accounted for 69% of the variation in decomposition rates of 15 Hawaiian litter types and up to 26% of the variation in enzyme activities. By explicitly representing diversity, trait-based models can predict ecosystem processes based on functional trait distributions in a community. The model developed herein illustrates that traits influencing microbial enzyme production are some of the key controls on litter decomposition rates.
引用
收藏
页码:1058 / 1070
页数:13
相关论文
共 70 条
[11]   Protein carbon content evolves in response to carbon availability and may influence the fate of duplicated genes [J].
Bragg, Jason G. ;
Wagner, Andreas .
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2007, 274 (1613) :1063-1070
[12]  
Carreiro MM, 2000, ECOLOGY, V81, P2359, DOI 10.1890/0012-9658(2000)081[2359:MESELD]2.0.CO
[13]  
2
[14]   Production of extracellular protease and glucose uptake in Bacillus clausii in steady-state and transient continuous cultures [J].
Christiansen, T ;
Nielsen, J .
JOURNAL OF BIOTECHNOLOGY, 2002, 97 (03) :265-273
[15]   C:N:P stoichiometry in soil:: is there a "Redfield ratio" for the microbial biomass? [J].
Cleveland, Cory C. ;
Liptzin, Daniel .
BIOGEOCHEMISTRY, 2007, 85 (03) :235-252
[16]   Bacterial growth efficiency in natural aquatic systems [J].
del Giorgio, PA ;
Cole, JJ .
ANNUAL REVIEW OF ECOLOGY AND SYSTEMATICS, 1998, 29 :503-541
[17]   Functional metagenomic profiling of nine biomes [J].
Dinsdale, Elizabeth A. ;
Edwards, Robert A. ;
Hall, Dana ;
Angly, Florent ;
Breitbart, Mya ;
Brulc, Jennifer M. ;
Furlan, Mike ;
Desnues, Christelle ;
Haynes, Matthew ;
Li, Linlin ;
McDaniel, Lauren ;
Moran, Mary Ann ;
Nelson, Karen E. ;
Nilsson, Christina ;
Olson, Robert ;
Paul, John ;
Brito, Beltran Rodriguez ;
Ruan, Yijun ;
Swan, Brandon K. ;
Stevens, Rick ;
Valentine, David L. ;
Thurber, Rebecca Vega ;
Wegley, Linda ;
White, Bryan A. ;
Rohwer, Forest .
NATURE, 2008, 452 (7187) :629-U8
[18]   THE EFFECT OF ADDED NITROGEN ON THE RATE OF DECOMPOSITION OF ORGANIC-MATTER [J].
FOG, K .
BIOLOGICAL REVIEWS, 1988, 63 (03) :433-462
[19]   An integrated biosphere model of land surface processes, terrestrial carbon balance, and vegetation dynamics [J].
Foley, JA ;
Prentice, IC ;
Ramankutty, N ;
Levis, S ;
Pollard, D ;
Sitch, S ;
Haxeltine, A .
GLOBAL BIOGEOCHEMICAL CYCLES, 1996, 10 (04) :603-628
[20]   Emergent biogeography of microbial communities in a model ocean [J].
Follows, Michael J. ;
Dutkiewicz, Stephanie ;
Grant, Scott ;
Chisholm, Sallie W. .
SCIENCE, 2007, 315 (5820) :1843-1846