QGene 4.0, an extensible Java']Java QTL-analysis platform

被引:300
作者
Joehanes, Roby [1 ]
Nelson, James C. [1 ]
机构
[1] Kansas State Univ, Dept Plant Pathol, Manhattan, KS 66506 USA
基金
美国国家科学基金会;
关键词
D O I
10.1093/bioinformatics/btn523
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Of many statistical methods developed to date for quantitative trait locus (QTL) analysis, only a limited subset are available in public software allowing their exploration, comparison and practical application by researchers. We have developed QGene 4.0, a plug-in platform that allows execution and comparison of a variety of modern QTL-mapping methods and supports third-party addition of new ones. The software accommodates line-cross mating designs consisting of any arbitrary sequence of selfing, backcrossing, intercrossing and haploid-doubling steps that includes map, population, and trait simulators; and is scriptable.
引用
收藏
页码:2788 / 2789
页数:2
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