Precise characterization of human histories in the H2A gene family by top down mass spectrometry

被引:132
作者
Boyne, MT
Pesavento, JJ
Mizzen, CA
Kelleher, NL
机构
[1] Univ Illinois, Dept Chem, Urbana, IL 61801 USA
[2] Univ Illinois, Dept Chem, Urbana, IL 61801 USA
[3] Univ Illinois, Dept Cell & Dev Biol, Urbana, IL 61801 USA
[4] Univ Illinois, Inst Genom Biol, Urbana, IL 61801 USA
[5] Univ Illinois, Ctr Top Down Proteom, Urbana, IL 61801 USA
关键词
histone H2A; Fourier transform mass spectrometry (FTMS); Top Down; post-translational modification (PTM); SILAC; cell cycle; ubiquitination; electron capture dissociation (ECD); histone code; chromatin;
D O I
10.1021/pr050269n
中图分类号
Q5 [生物化学];
学科分类号
071010 [生物化学与分子生物学]; 081704 [应用化学];
摘要
Top Down analysis revealed that at least fourteen genes encoding histone H2A are coexpressed in HeLa cells. Characterization of these species' revealed that all except H2A.Z and H2A.F/Z were alpha-N-acetylated, H2A.O and H2A.C,D,I,N,P were the most abundant, and those exceeding similar to 10% abundance lacked post-translational modifications. This unequivocal identification of H2A forms illustrates the advantages of Top Down Mass Spectrometry and provides a global perspective of H2A regulation through the cell cycle.
引用
收藏
页码:248 / 253
页数:6
相关论文
共 31 条
[1]
The human H2A and H2B histone gene complement [J].
Albig, W ;
Trappe, R ;
Kardalinou, E ;
Eick, S ;
Doenecke, D .
BIOLOGICAL CHEMISTRY, 1999, 380 (01) :7-18
[2]
The enhancement of histone H4 and H2A serine 1 phosphorylation during mitosis and S-phase is evolutionarily conserved [J].
Barber, CM ;
Turner, FB ;
Wang, YM ;
Hagstrom, K ;
Taverna, SD ;
Mollah, S ;
Ueberheide, B ;
Meyer, BJ ;
Hunt, DF ;
Cheung, P ;
Allis, CD .
CHROMOSOMA, 2004, 112 (07) :360-371
[3]
Mass spectrometric analysis of histone posttranslational modifications [J].
Burlingame, AL ;
Zhang, X ;
Chalkley, RJ .
METHODS, 2005, 36 (04) :383-394
[4]
Protein identification using sequential ion/ion reactions and tandem mass spectrometry [J].
Coon, JJ ;
Ueberheide, B ;
Syka, JEP ;
Dryhurst, DD ;
Ausio, J ;
Shabanowitz, J ;
Hunt, DF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (27) :9463-9468
[5]
Application of mass spectrometry to the identification and quantification of histone post-translational modifications [J].
Freitas, MA ;
Sklenar, AR ;
Parthun, MR .
JOURNAL OF CELLULAR BIOCHEMISTRY, 2004, 92 (04) :691-700
[6]
Global regulation of post-translational modifications on core histones [J].
Galasinski, SC ;
Louie, DF ;
Gloor, KK ;
Resing, KA ;
Ahn, NG .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (04) :2579-2588
[7]
Histone acetylation in chromatin structure and transcription [J].
Grunstein, M .
NATURE, 1997, 389 (6649) :349-352
[8]
Automated reduction and interpretation of high resolution electrospray mass spectra of large molecules [J].
Horn, DM ;
Zubarev, RA ;
McLafferty, FW .
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2000, 11 (04) :320-332
[9]
Functional consequences of histone modifications [J].
Iizuka, M ;
Smith, MM .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2003, 13 (02) :154-160
[10]
Histone ubiquitination:: a tagging tail unfolds? [J].
Jason, LJM ;
Moore, SC ;
Lewis, JD ;
Lindsey, G ;
Ausió, J .
BIOESSAYS, 2002, 24 (02) :166-174