Comparison of laboratory-based and phylogenetic methods to distinguish between Haemophilus influenzae and H. haemolyticus

被引:40
作者
Sandstedt, Sara A. [1 ]
Zhang, Lixin [1 ]
Patel, Mayurika [2 ]
McCrea, Kirk W. [2 ]
Qin, Zhaohui [3 ]
Marrs, Carl F. [1 ]
Gilsdorf, Janet R. [1 ,2 ]
机构
[1] Univ Michigan, Sch Publ Hlth, Dept Epidemiol, Ann Arbor, MI 48109 USA
[2] Univ Michigan, Sch Med, Dept Pediat & Communicable Dis, Ann Arbor, MI 48109 USA
[3] Univ Michigan, Sch Publ Hlth, Dept Biostat, Ann Arbor, MI 48109 USA
关键词
Haemophilus haemolyticus; Nontypeable Haemophilus influenzae; Haemophilus classification; P67F3; epitope; Immunoglobulin A1 protease;
D O I
10.1016/j.mimet.2008.06.023
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
New methods to distinguish between nontypeable Haemophilus influenzae and nonhemolytic H. haemolyticus were compared. The results of iga variable region hybridization to dotblots and library-on-a-slide microarrays were more similar to a "gold standard" multigenephylogenetic tree than iga-conserved region hybridization or P6 7F3 epitope immunoblots. (C) 2008 Elsevier B.V. All rights reserved.
引用
收藏
页码:369 / 371
页数:3
相关论文
共 17 条
[1]   MAXIMUM LIKELIHOOD FROM INCOMPLETE DATA VIA EM ALGORITHM [J].
DEMPSTER, AP ;
LAIRD, NM ;
RUBIN, DB .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-METHODOLOGICAL, 1977, 39 (01) :1-38
[2]   Diversity and sharing of Haemophilus influenzae strains colonizing healthy children attending day-care centers [J].
Farjo, RS ;
Foxman, B ;
Patel, MJ ;
Zhang, LX ;
Pettigrew, MM ;
McCcoy, SI ;
Marrs, CF ;
Gilsdorf, JR .
PEDIATRIC INFECTIOUS DISEASE JOURNAL, 2004, 23 (01) :41-46
[3]   CASES IN WHICH PARSIMONY OR COMPATIBILITY METHODS WILL BE POSITIVELY MISLEADING [J].
FELSENSTEIN, J .
SYSTEMATIC ZOOLOGY, 1978, 27 (04) :401-410
[4]   Enhanced model-based clustering, density estimation, and discriminant analysis software: MCLUST [J].
Fraley, C ;
Raftery, AE .
JOURNAL OF CLASSIFICATION, 2003, 20 (02) :263-286
[5]  
GRANOFF DM, 1979, PEDIATRICS, V63, P397
[6]   Histidine auxotrophy in commensal and disease-causing nontypeable Haemophilus influenzae [J].
Juliao, Patricia C. ;
Marrs, Carl F. ;
Xie, Jingping ;
Gilsdorf, Janet R. .
JOURNAL OF BACTERIOLOGY, 2007, 189 (14) :4994-5001
[7]   TAXONOMIC STUDY OF GENUS HEMOPHILUS, WITH PROPOSAL OF A NEW SPECIES [J].
KILIAN, M .
JOURNAL OF GENERAL MICROBIOLOGY, 1976, 93 (MAR) :9-62
[8]  
Kilian M., 2005, BERGEYS MANUAL SYSTE, V2B, P883
[9]   Population-based study of deletions in five different genomic regions of Mycobacterium tuberculosis and possible clinical relevance of the deletions [J].
Kong, Y. ;
Cave, M. D. ;
Zhang, L. ;
Foxman, B. ;
Marrs, C. F. ;
Bates, J. H. ;
Yang, Z. H. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2006, 44 (11) :3940-3946
[10]   Relationships of nontypeable Haemophilus influenzae strains to hemolytic and nonhemolytic Haemophilus haemolyticus strains [J].
McCrea, Kirk W. ;
Xie, Jingping ;
LaCross, Nathan ;
Patel, Mayurika ;
Mukundan, Deepa ;
Murphy, Timothy F. ;
Marrs, Carl F. ;
Gilsdorf, Janet R. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2008, 46 (02) :406-416