DNA protection by stress-induced biocrystallization

被引:292
作者
Wolf, SG
Frenkiel, D
Arad, T
Finkel, SE
Kolter, R
Minsky, A [1 ]
机构
[1] Weizmann Inst Sci, Dept Organ Chem, IL-76100 Rehovot, Israel
[2] Weizmann Inst Sci, Dept Biol Struct, IL-76100 Rehovot, Israel
[3] Harvard Univ, Sch Med, Dept Microbiol & Mol Genet, Boston, MA 02115 USA
关键词
D O I
10.1038/21918
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The crystalline state is considered to be incompatible with life. However, in living systems exposed to severe environmental assaults, the sequestration of vital macromolecules in intracellular crystalline assemblies may provide an efficient means for protection. Here we report a generic defence strategy found in Escherichia coli, involving co-crystallization of its DNA with the stress-induced protein Dps(1,2). We show that when purified Dps and DNA interact, extremely stable crystals form almost instantaneously, within which DNA is sequestered and effectively protected against varied assaults. Crystalline structures with similar lattice spacings are formed in E. coli in which Dps is slightly over expressed, as well as in starved wild-type bacteria. Hence, DNA-Dps co-crystallization is proposed to represent a binding mode that provides wide-range protection of DNA by sequestration. The rapid induction and large-scale production of Dps in response to stress, as well as the presence of Dps homologues in many distantly related bacteria, indicate that DNA protection by biocrystallization may be crucial and widespread in prokaryotes.
引用
收藏
页码:83 / 85
页数:3
相关论文
共 22 条
[1]   AFM analysis of DNA-protamine complexes bound to mica [J].
Allen, MJ ;
Bradbury, EM ;
Balhorn, R .
NUCLEIC ACIDS RESEARCH, 1997, 25 (11) :2221-2226
[2]   A NOVEL DNA-BINDING PROTEIN WITH REGULATORY AND PROTECTIVE ROLES IN STARVED ESCHERICHIA-COLI [J].
ALMIRON, M ;
LINK, AJ ;
FURLONG, D ;
KOLTER, R .
GENES & DEVELOPMENT, 1992, 6 (12B) :2646-2654
[3]   THE DPS PROMOTER IS ACTIVATED BY OXYR DURING GROWTH AND BY IHF AND A SIGMA(S) IN STATIONARY-PHASE [J].
ALTUVIA, S ;
ALMIRON, M ;
HUISMAN, G ;
KOLTER, R ;
STORZ, G .
MOLECULAR MICROBIOLOGY, 1994, 13 (02) :265-272
[4]  
BERNARDIN WD, 1986, J MOL BIOL, V189, P503
[5]   A novel non-heme iron-binding ferritin related to the DNA-binding proteins of the Dps family in Listeria innocua [J].
Bozzi, M ;
Mignogna, G ;
Stefanini, S ;
Barra, D ;
Longhi, C ;
Valenti, P ;
Chiancone, E .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1997, 272 (06) :3259-3265
[6]   BACILLUS-SUBTILIS MRGA IS A DPS(PEXB) HOMOLOG - EVIDENCE FOR METALLOREGULATION OF AN OXIDATIVE-STRESS GENE [J].
CHEN, L ;
HELMANN, JD .
MOLECULAR MICROBIOLOGY, 1995, 18 (02) :295-300
[7]   IDENTIFICATION OF 4 NEW PROKARYOTIC BACTERIOFERRITINS, FROM HELICOBACTER-PYLORI, ANABAENA-VARIABILIS, BACILLUS-SUBTILIS AND TREPONEMA-PALLIDUM, BY ANALYSIS OF GENE-SEQUENCES [J].
EVANS, DJ ;
EVANS, DG ;
LAMPERT, HC ;
NAKANO, H .
GENE, 1995, 153 (01) :123-127
[8]   RIBOSOMES EXIST IN LARGE EXCESS OVER THE APPARENT DEMAND FOR PROTEIN-SYNTHESIS DURING CARBON STARVATION IN MARINE VIBRIO SP STRAIN-CCUG-15956 [J].
FLARDH, K ;
COHEN, PS ;
KJELLEBERG, S .
JOURNAL OF BACTERIOLOGY, 1992, 174 (21) :6780-6788
[9]   PARACRYSTALLINE INCLUSIONS OF A NOVEL FERRITIN CONTAINING NONHEME IRON, PRODUCED BY THE HUMAN GASTRIC PATHOGEN HELICOBACTER-PYLORI - EVIDENCE FOR A 3RD CLASS OF FERRITINS [J].
FRAZIER, BA ;
PFEIFER, JD ;
RUSSELL, DG ;
FALK, P ;
OLSEN, AN ;
HAMMAR, M ;
WESTBLOM, TU ;
NORMARK, SJ .
JOURNAL OF BACTERIOLOGY, 1993, 175 (04) :966-972
[10]   The crystal structure of Dps, a ferritin homolog that binds and protects DNA [J].
Grant, RA ;
Filman, DJ ;
Finkel, SE ;
Kolter, R ;
Hogle, JM .
NATURE STRUCTURAL BIOLOGY, 1998, 5 (04) :294-303