共 105 条
The evolution and functional diversification of animal microRNA genes
被引:110
作者:

Liu, Na
论文数: 0 引用数: 0
h-index: 0
机构:
Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA

Okamura, Katsutomo
论文数: 0 引用数: 0
h-index: 0
机构:
Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA

Tyler, David M.
论文数: 0 引用数: 0
h-index: 0
机构:
Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA

Phillips, Michael D.
论文数: 0 引用数: 0
h-index: 0
机构:
Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA

Chung, Wei-Jen
论文数: 0 引用数: 0
h-index: 0
机构:
Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA

Lai, Eric C.
论文数: 0 引用数: 0
h-index: 0
机构:
Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA
机构:
[1] Sloan Kettering Inst, Dept Dev Biol, Rockefeller Res Labs 521, New York, NY 10065 USA
关键词:
microRNA;
evolution;
subfunctionalization;
neofunctionalization;
D O I:
10.1038/cr.2008.278
中图分类号:
Q2 [细胞生物学];
学科分类号:
071009 ;
090102 ;
摘要:
microRNAs (miRNAs) are an abundant class of similar to 22 nucleotide (nt) regulatory RNAs that are pervasive in higher eukaryotic genomes. In order to fully understand their prominence in genomes, it is necessary to elucidate the molecular mechanisms that can diversify miRNA activities. In this review, we describe some of the many strategies that allow novel miRNA functions to emerge, with particular emphasis on how miRNA genes evolve in animals. These mechanisms include changes in their sequence, processing, or expression pattern; acquisition of miRNA* functionality or antisense processing; and de novo gene birth. The facility and versatility of miRNAs to evolve and change likely underlies how they have become dominant constituents of higher genomes.
引用
收藏
页码:985 / 996
页数:12
相关论文
共 105 条
[1]
The let-7 microRNA family members mir-48, mir-84, and mir-241 function together to regulate developmental timing in Caenorhabditis elegans
[J].
Abbott, AL
;
Alvarez-Saavedra, E
;
Miska, EA
;
Lau, NC
;
Bartel, DP
;
Horvitz, HR
;
Ambros, V
.
DEVELOPMENTAL CELL,
2005, 9 (03)
:403-414

Abbott, AL
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Alvarez-Saavedra, E
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Miska, EA
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Lau, NC
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Bartel, DP
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Horvitz, HR
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Ambros, V
论文数: 0 引用数: 0
h-index: 0
机构:
Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA
[2]
Drosophila microRNAs exhibit diverse spatial expression patterns during embryonic development
[J].
Aboobaker, AA
;
Tomancak, P
;
Patel, N
;
Rubin, GM
;
Lai, EC
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
2005, 102 (50)
:18017-18022

Aboobaker, AA
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA

Tomancak, P
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA

Patel, N
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA

Rubin, GM
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA

Lai, EC
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA
[3]
A uniform system for microRNA annotation
[J].
Ambros, V
;
Bartel, B
;
Bartel, DP
;
Burge, CB
;
Carrington, JC
;
Chen, XM
;
Dreyfuss, G
;
Eddy, SR
;
Griffiths-Jones, S
;
Marshall, M
;
Matzke, M
;
Ruvkun, G
;
Tuschl, T
.
RNA,
2003, 9 (03)
:277-279

Ambros, V
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Bartel, B
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Bartel, DP
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Burge, CB
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Carrington, JC
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Chen, XM
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Dreyfuss, G
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Eddy, SR
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Griffiths-Jones, S
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Marshall, M
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Matzke, M
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Ruvkun, G
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Tuschl, T
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA
[4]
The small RNA profile during Drosophila melanogaster development
[J].
Aravin, AA
;
Lagos-Quintana, M
;
Yalcin, A
;
Zavolan, M
;
Marks, D
;
Snyder, B
;
Gaasterland, T
;
Meyer, J
;
Tuschl, T
.
DEVELOPMENTAL CELL,
2003, 5 (02)
:337-350

Aravin, AA
论文数: 0 引用数: 0
h-index: 0
机构: Rockefeller Univ, Lab RNA Mol Biol, New York, NY 10021 USA

Lagos-Quintana, M
论文数: 0 引用数: 0
h-index: 0
机构: Rockefeller Univ, Lab RNA Mol Biol, New York, NY 10021 USA

Yalcin, A
论文数: 0 引用数: 0
h-index: 0
机构: Rockefeller Univ, Lab RNA Mol Biol, New York, NY 10021 USA

Zavolan, M
论文数: 0 引用数: 0
h-index: 0
机构: Rockefeller Univ, Lab RNA Mol Biol, New York, NY 10021 USA

Marks, D
论文数: 0 引用数: 0
h-index: 0
机构: Rockefeller Univ, Lab RNA Mol Biol, New York, NY 10021 USA

Snyder, B
论文数: 0 引用数: 0
h-index: 0
机构: Rockefeller Univ, Lab RNA Mol Biol, New York, NY 10021 USA

Gaasterland, T
论文数: 0 引用数: 0
h-index: 0
机构: Rockefeller Univ, Lab RNA Mol Biol, New York, NY 10021 USA

Meyer, J
论文数: 0 引用数: 0
h-index: 0
机构: Rockefeller Univ, Lab RNA Mol Biol, New York, NY 10021 USA

Tuschl, T
论文数: 0 引用数: 0
h-index: 0
机构: Rockefeller Univ, Lab RNA Mol Biol, New York, NY 10021 USA
[5]
Characterization of the intergenic RNA profile at abdominal-A and Abdominal-B in the Drosophila bithorax complex
[J].
Bae, E
;
Calhoun, VC
;
Levine, M
;
Lewis, EB
;
Drewell, RA
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
2002, 99 (26)
:16847-16852

Bae, E
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Berkeley, Dept Mol & Cell Biol, Div Genet & Dev, Berkeley, CA 94720 USA

Calhoun, VC
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Berkeley, Dept Mol & Cell Biol, Div Genet & Dev, Berkeley, CA 94720 USA

Levine, M
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Berkeley, Dept Mol & Cell Biol, Div Genet & Dev, Berkeley, CA 94720 USA

Lewis, EB
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Berkeley, Dept Mol & Cell Biol, Div Genet & Dev, Berkeley, CA 94720 USA

Drewell, RA
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Berkeley, Dept Mol & Cell Biol, Div Genet & Dev, Berkeley, CA 94720 USA
[6]
Regulation by let-7 and lin-4 miRNAs results in target mRNA degradation
[J].
Bagga, S
;
Bracht, J
;
Hunter, S
;
Massirer, K
;
Holtz, J
;
Eachus, R
;
Pasquinelli, AE
.
CELL,
2005, 122 (04)
:553-563

Bagga, S
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA

Bracht, J
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA

Hunter, S
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA

Massirer, K
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA

Holtz, J
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA

Eachus, R
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA

Pasquinelli, AE
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA
[7]
Micromanagers of gene expression: the potentially widespread influence of metazoan microRNAs
[J].
Bartel, DP
;
Chen, CZ
.
NATURE REVIEWS GENETICS,
2004, 5 (05)
:396-400

Bartel, DP
论文数: 0 引用数: 0
h-index: 0
机构: Whitehead Inst Biomed Res, Cambridge, MA 02142 USA

Chen, CZ
论文数: 0 引用数: 0
h-index: 0
机构: Whitehead Inst Biomed Res, Cambridge, MA 02142 USA
[8]
How does RNA editing affect dsRNA-mediated gene silencing?
[J].
Bass, B. L.
.
COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY,
2006, 71
:285-292

Bass, B. L.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Utah, Dept Biochem, Salt Lake City, UT 84112 USA Univ Utah, Dept Biochem, Salt Lake City, UT 84112 USA
[9]
Mammalian non-LTR retrotransposons: For better or worse, in sickness and in health
[J].
Belancio, Victoria P.
;
Hedges, Dale J.
;
Deininger, Prescott
.
GENOME RESEARCH,
2008, 18 (03)
:343-358

Belancio, Victoria P.
论文数: 0 引用数: 0
h-index: 0
机构: Tulane Univ, Hlth Sci Ctr, Tulane Canc Ctr, New Orleans, LA 70112 USA

Hedges, Dale J.
论文数: 0 引用数: 0
h-index: 0
机构: Tulane Univ, Hlth Sci Ctr, Tulane Canc Ctr, New Orleans, LA 70112 USA

Deininger, Prescott
论文数: 0 引用数: 0
h-index: 0
机构:
Tulane Univ, Hlth Sci Ctr, Tulane Canc Ctr, New Orleans, LA 70112 USA Tulane Univ, Hlth Sci Ctr, Tulane Canc Ctr, New Orleans, LA 70112 USA
[10]
MicroRNAs in the Drosophila bithorax complex
[J].
Bender, Welcome
.
GENES & DEVELOPMENT,
2008, 22 (01)
:14-19

Bender, Welcome
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Dept Biol Chem & Mol Pharmacol, Boston, MA 02115 USA Harvard Univ, Sch Med, Dept Biol Chem & Mol Pharmacol, Boston, MA 02115 USA