Putative conformations of the receptor-binding domain in S protein of hCoV-EMC in complex with its receptor dipeptidyl peptidase-4

被引:7
作者
Jiang, Shibo [1 ,2 ]
Lu, Lu [1 ,2 ]
Du, Lanying [3 ]
Debnath, Asim K. [3 ]
机构
[1] Fudan Univ, Shanghai Med Coll, Key Lab Med Mol Virol, Minist Educ & Hlth, Shanghai 200433, Peoples R China
[2] Fudan Univ, Inst Med Microbiol, Shanghai 200433, Peoples R China
[3] New York Blood Ctr, Lindsley F Kimball Res Inst, New York, NY 10021 USA
关键词
CORONAVIRUS; DOCKING;
D O I
10.1016/j.jinf.2013.04.007
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
引用
收藏
页码:156 / 158
页数:3
相关论文
共 12 条
[1]   ClusPro: Performance in CAPRI rounds 6-11 and the new server [J].
Comeau, Stephen R. ;
Kozakov, Dima ;
Brenke, Ryan ;
Shen, Yang ;
Beglov, Dmitri ;
Vajda, Sandor .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2007, 69 (04) :781-785
[2]   A predicted receptor-binding and critical neutralizing domain in S protein of the novel human coronavirus HCoV-EMC [J].
Jiang, Shibo ;
Lu, Lu ;
Du, Lanying ;
Debnath, Asim K. .
JOURNAL OF INFECTION, 2013, 66 (05) :464-466
[3]   PIPER: An FFT-based protein docking program with pairwise potentials [J].
Kozakov, Dima ;
Brenke, Ryan ;
Comeau, Stephen R. ;
Vajda, Sandor .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2006, 65 (02) :392-406
[4]   Inference of macromolecular assemblies from crystalline state [J].
Krissinel, Evgeny ;
Henrick, Kim .
JOURNAL OF MOLECULAR BIOLOGY, 2007, 372 (03) :774-797
[5]   Structure of SARS coronavirus spike receptor-binding domain complexed with receptor [J].
Li, F ;
Li, WH ;
Farzan, M ;
Harrison, SC .
SCIENCE, 2005, 309 (5742) :1864-1868
[6]   Human Coronavirus EMC Does Not Require the SARS-Coronavirus Receptor and Maintains Broad Replicative Capability in Mammalian Cell Lines [J].
Mueller, Marcel A. ;
Raj, V. Stalin ;
Muth, Doreen ;
Meyer, Benjamin ;
Kallies, Stephan ;
Smits, Saskia L. ;
Wollny, Robert ;
Bestebroer, Theo M. ;
Specht, Sabine ;
Suliman, Tasnim ;
Zimmermann, Katrin ;
Binger, Tabea ;
Eckerle, Isabella ;
Tschapka, Marco ;
Zaki, Ali M. ;
Osterhaus, Albert D. M. E. ;
Fouchier, Ron A. M. ;
Haagmans, Bart L. ;
Drosten, Christian .
MBIO, 2012, 3 (06)
[7]   High-resolution structure of human apo dipeptidyl peptidase IV/CD26 and its complex with 1-[({2-[(5-iodopyridin-2-yl)amino]-ethyl}amino)-acetyl]-2-cyano-(S)-pyrrolidine [J].
Oefner, C ;
D'Arcy, A ;
Mac Sweeney, A ;
Pierau, S ;
Gardiner, R ;
Dale, GE .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2003, 59 :1206-1212
[8]   Structure of severe acute respiratory syndrome coronavirus receptor-binding domain complexed with neutralizing antibody [J].
Prabakaran, Ponraj ;
Gan, Jianhua ;
Feng, Yang ;
Zhu, Zhongyu ;
Choudhry, Vidita ;
Xiao, Xiaodong ;
Ji, Xinhua ;
Dimitrov, Dimiter S. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2006, 281 (23) :15829-15836
[9]   Dipeptidyl peptidase 4 is a functional receptor for the emerging human coronavirus-EMC [J].
Raj, V. Stalin ;
Mou, Huihui ;
Smits, Saskia L. ;
Dekkers, Dick H. W. ;
Mueller, Marcel A. ;
Dijkman, Ronald ;
Muth, Doreen ;
Demmers, Jeroen A. A. ;
Zaki, Ali ;
Fouchier, Ron A. M. ;
Thiel, Volker ;
Drosten, Christian ;
Rottier, Peter J. M. ;
Osterhaus, Albert D. M. E. ;
Bosch, Berend Jan ;
Haagmans, Bart L. .
NATURE, 2013, 495 (7440) :251-254
[10]   Ultra-fast FFT protein docking on graphics processors [J].
Ritchie, David W. ;
Venkatraman, Vishwesh .
BIOINFORMATICS, 2010, 26 (19) :2398-2405