Unraveling plant-microbe interactions: can multi-species transcriptomics help?

被引：102

作者：

Schenk, Peer M. ^{[1
]}

Carvalhais, Lilia C. ^{[1
]}

Kazan, Kemal ^{[2
]}

机构：

[1] Univ Queensland, Sch Agr & Food Sci, Brisbane, Qld 4072, Australia

[2] CSIRO Plant Ind, Queensland Biosci Precinct, St Lucia, Qld 4067, Australia

来源：

TRENDS IN BIOTECHNOLOGY | 2012年 / 30卷 / 03期

基金：

澳大利亚研究理事会;

关键词：

INDUCED SYSTEMIC RESISTANCE; ANALYSIS REVEALS; ARABIDOPSIS-THALIANA; METABOLITE ANALYSIS; GROWTH PROMOTION; GENE-EXPRESSION; SOIL; RESPONSES; PATHOGEN; MICROARRAY;

D O I：

10.1016/j.tibtech.2011.11.002

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

Plants in their natural habitats are surrounded by a large number of microorganisms. Some microbes directly interact with plants in a mutually beneficial manner whereas others colonize the plant only for their own benefit. In addition, microbes can indirectly affect plants by drastically altering their environments. Understanding the complex nature of plant-microbe interactions can potentially offer new strategies to enhance plant productivity in an environmentally friendly manner. As briefly reviewed here, the emerging area of multi-species transcriptomics holds the promise to provide knowledge on how this can be achieved. We discuss key aspects of how transcriptome analysis can be used to provide a more comprehensive picture of the complex interactions of plants with their biotic and abiotic environments.

引用

页码：177 / 184

页数：8

共 94 条

[11] Functional biology of plant phosphate uptake at root and mycorrhiza interfaces [J].

Bucher, Marcel .

NEW PHYTOLOGIST, 2007, 173 (01) :11-26

[12]

Campbell R., 1990, The rhizosphere., P11

[13] Transcriptome analysis of Arabidopsis colonized by a plant-growth promoting rhizobacterium reveals a general effect on disease resistance [J].

Cartieaux, F ;

Thibaud, MC ;

Zimmerli, L ;

Lessard, P ;

Sarrobert, C ;

David, P ;

Gerbaud, A ;

Robaglia, C ;

Somerville, S ;

Nussaume, L .

PLANT JOURNAL, 2003, 36 (02) :177-188

[14] Simultaneous interaction of Arabidopsis thaliana with Bradyrhizobium sp strain ORS278 and Pseudomonas syriugae pv. tomato DC3000 leads to complex transcriptome changes [J].

Cartieaux, Fabienne ;

Contesto, Celine ;

Gallou, Adrien ;

Desbrosses, Guilhem ;

Kopka, Joachim ;

Taconnat, Ludivine ;

Renou, Jean-Pierre ;

Touraine, Bruno .

MOLECULAR PLANT-MICROBE INTERACTIONS, 2008, 21 (02) :244-259

[15] How close are we to nitrogen-fixing cereals? [J].

Charpentier, Myriam ;

Oldroyd, Giles .

CURRENT OPINION IN PLANT BIOLOGY, 2010, 13 (05) :556-564

[16] Genome analysis of Bacillus amyloliquefaciens FZB42 reveals its potential for biocontrol of plant pathogens [J].

Chen, X. H. ;

Koumoutsi, A. ;

Scholz, R. ;

Schneider, K. ;

Vater, J. ;

Suessmuth, R. ;

Piel, J. ;

Borriss, R. .

JOURNAL OF BIOTECHNOLOGY, 2009, 140 (1-2) :27-37

[17] Priming in plant-pathogen interactions [J].

Conrath, U ;

Pieterse, CMJ ;

Mauch-Mani, B .

TRENDS IN PLANT SCIENCE, 2002, 7 (05) :210-216

[18] C4GEM, a Genome-Scale Metabolic Model to Study C4 Plant Metabolism [J].

Dal'Molin, Cristiana Gomes de Oliveira ;

Quek, Lake-Ee ;

Palfreyman, Robin William ;

Brumbley, Stevens Michael ;

Nielsen, Lars Keld .

PLANT PHYSIOLOGY, 2010, 154 (04) :1871-1885

[19] AraGEM, a Genome-Scale Reconstruction of the Primary Metabolic Network in Arabidopsis [J].

Dal'Molin, Cristiana Gomes de Oliveira ;

Quek, Lake-Ee ;

Palfreyman, Robin William ;

Brumbley, Stevens Michael ;

Nielsen, Lars Keld .

PLANT PHYSIOLOGY, 2010, 152 (02) :579-589

[20] Rhizobacteria-Induced Systemic Resistance [J].

De Vleesschauwer, David ;

Hofte, Monica .

PLANT INNATE IMMUNITY, 2009, 51 :223-281

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