MicroRNA expression signatures accurately discriminate acute lymphoblastic leukemia from acute myeloid leukemia

被引:365
作者
Mi, Shuangli [2 ]
Lu, Jun [1 ,3 ]
Sun, Miao [2 ]
Li, Zejuan [2 ]
Zhang, Hao [1 ]
Neilly, Mary Beth [2 ]
Wang, Yungui [4 ]
Qian, Zhijian [2 ]
Jin, Jie [4 ]
Zhang, Yanming [2 ]
Bohlander, Stefan K. [5 ,7 ]
Le Beau, Michelle M. [2 ]
Larson, Richard A. [2 ]
Golub, Todd R. [1 ,3 ,6 ]
Rowley, Janet D. [2 ]
Chen, Jianjun [2 ]
机构
[1] MIT, Broad Inst, Cambridge, MA 02141 USA
[2] Univ Chicago, Dept Med, Chicago, IL 60637 USA
[3] Dana Farber Canc Inst, Dept Pediat Oncol, Boston, MA 02115 USA
[4] Zhejiang Univ, Sch Med, Inst Hematol, Affiliated Hosp 1, Hangzhou 310003, Zhejiang, Peoples R China
[5] Univ Munich, Hosp Grossharden, Dept Med 3, D-81377 Munich, Germany
[6] Harvard Univ, Sch Med, Howard Hughes Med Inst, Boston, MA 02115 USA
[7] GSF Munich, Natl Res Ctr Environm Hlth, Clin Cooperat Grp Leukemia, D-81377 Munich, Germany
关键词
expression profiling; lineage classification; diagnosis; prediction; DNA copy number;
D O I
10.1073/pnas.0709313104
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Acute lymphoblastic leukemia (ALL) is the most common childhood cancer, whereas acute myeloid leukemia (AML) is the most common acute leukemia in adults. In general, ALL has a better prognosis than AML. To understand the distinct mechanisms in leukemogenesis between ALL and AML and to identify markers for diagnosis and treatment, we performed a large-scale genomewide microRNA (miRNA, miR) expression profiling assay and identified 27 miRNAs that are differentially expressed between ALL and AML. Among them, miR-128a and -128b are significantly overexpressed, whereas let-7b and miR-223 are significantly down-regulated in ALL compared with AML. They are the most discriminatory miRNAs between ALL and AML. Using the expression signatures of a minimum of two of these miRNAs resulted in an accuracy rate of >95% in the diagnosis of ALL and AML. The differential expression patterns of these four miRNAs were validated further through large-scale real-time PCR on 98 acute leukemia samples covering most of the common cytogenetic subtypes, along with 10 normal control samples. Furthermore, we found that overexpression of miR-128 in ALL was at least partly associated with promoter hypomethylation and not with an amplification of its genomic locus. Taken together, we showed that expression signatures of as few as two miRNAs could accurately discriminate ALL from AML, and that epigenetic regulation might play an important role in the regulation of expression of miRNAs in acute leukemias.
引用
收藏
页码:19971 / 19976
页数:6
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