Water interaction with α,α-trehalose:: molecular dynamics simulation

被引:59
作者
Bonanno, G
Noto, R
Fornili, SL
机构
[1] INFM, I-90123 Palermo, Italy
[2] Dept Phys & Astron Sci, I-90123 Palermo, Italy
[3] Inst Interdisciplinary Applicat Phys, CNR, I-90123 Palermo, Italy
来源
JOURNAL OF THE CHEMICAL SOCIETY-FARADAY TRANSACTIONS | 1998年 / 94卷 / 18期
关键词
D O I
10.1039/a804257h
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
This paper reports on simulations of a rather large water-trehalose system, based on the AMBER compatible GLYCAM force-field (R. J. Woods, R. A. Dwek, C. J. Edge and B. Fraser-Reid, J. Phys. Chem., 1995, 99, 3832), whose applicability to trehalose has been carefully examined using ab initio quantum mechanical calculations to optimize the molecular geometry and to evaluate the net atomic charges. Statistical analyses of the simulation trajectories show that the structure and dynamics of the solvent are remarkably affected by the presence of trehalose. In particular, ca. 36 water molecules are found to reside in the first hydration shell, 19 of which are hydrogen bonded to trehalose. The water mobility within the first hydration shell is ca. 25% smaller than that of pure water.
引用
收藏
页码:2755 / 2762
页数:8
相关论文
共 36 条
[21]   PHASE-RELATIONS AND VITRIFICATION IN SACCHARIDE-WATER SOLUTIONS AND THE TREHALOSE ANOMALY [J].
GREEN, JL ;
ANGELL, CA .
JOURNAL OF PHYSICAL CHEMISTRY, 1989, 93 (08) :2880-2882
[22]   COMPARISON OF SIMPLE POTENTIAL FUNCTIONS FOR SIMULATING LIQUID WATER [J].
JORGENSEN, WL ;
CHANDRASEKHAR, J ;
MADURA, JD ;
IMPEY, RW ;
KLEIN, ML .
JOURNAL OF CHEMICAL PHYSICS, 1983, 79 (02) :926-935
[23]   SOLVENT EFFECT ON THE CONFORMATION OF THE HYDROXYMETHYL GROUP ESTABLISHED BY MOLECULAR-DYNAMICS SIMULATIONS OF METHYL-BETA-D-GLUCOSIDE IN WATER [J].
KROONBATENBURG, LMJ ;
KROON, J .
BIOPOLYMERS, 1990, 29 (8-9) :1243-1248
[24]   THE SPATIAL STRUCTURE IN LIQUID WATER [J].
KUSALIK, PG ;
SVISHCHEV, IM .
SCIENCE, 1994, 265 (5176) :1219-1221
[25]   Molecular dynamics studies of the hydration of alpha,alpha-trehalose [J].
Liu, Q ;
Schmidt, RK ;
Teo, B ;
Karplus, PA ;
Brady, JW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1997, 119 (33) :7851-7862
[26]   Thermophysical properties of trehalose and its concentrated aqueous solutions [J].
Miller, DP ;
dePablo, JJ ;
Corti, H .
PHARMACEUTICAL RESEARCH, 1997, 14 (05) :578-590
[27]  
PANEK AD, 1995, BRAZ J MED BIOL RES, V28, P169
[28]   POLYSACCHARIDE CONFORMATION .10. SOLVENT AND TEMPERATURE EFFECTS ON OPTICAL-ROTATION AND CONFORMATION OF MODEL CARBOHYDRATES [J].
REES, DA ;
THOM, D .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1977, (02) :191-201
[29]  
ROSER B, 1991, TRENDS FOOD SCI TECH, V7, P166
[30]   NUMERICAL-INTEGRATION OF CARTESIAN EQUATIONS OF MOTION OF A SYSTEM WITH CONSTRAINTS - MOLECULAR-DYNAMICS OF N-ALKANES [J].
RYCKAERT, JP ;
CICCOTTI, G ;
BERENDSEN, HJC .
JOURNAL OF COMPUTATIONAL PHYSICS, 1977, 23 (03) :327-341