Activity-based probes: discovering new biology and new drug targets

被引:159
作者
Heal, William P. [1 ]
Dang, T. H. Tam [1 ]
Tate, Edward W. [1 ,2 ]
机构
[1] Univ London Imperial Coll Sci Technol & Med, Dept Chem, London SW7 2AZ, England
[2] Univ London Imperial Coll Sci Technol & Med, Inst Biol Chem, London SW7 2AZ, England
基金
英国医学研究理事会; 英国生物技术与生命科学研究理事会;
关键词
BIOORTHOGONAL LIGATION CHEMISTRY; CHEMICAL-PROTEOMIC TOOLS; N-MYRISTOYL TRANSFERASE; FATTY-ACID SYNTHASE; IN-VIVO; CLOSTRIDIUM-DIFFICILE; SERINE HYDROLASES; CLICK CHEMISTRY; PROTEIN; ENZYME;
D O I
10.1039/c0cs00004c
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The development and application of chemical technologies enabling direct analysis of enzyme activity in living systems has undergone explosive growth in recent years. Activity-based protein profiling (ABPP) is a key constituent of this broad field, and is among the most powerful and mature chemical proteomic technologies. This tutorial review introduces the essential features of ABPP and the design and application of activity-based probes (ABPs) from drug target elucidation and in vivo visualisation of enzyme activity to comprehensive profiling of the catalytic content of living systems, and the discovery of new biological pathways.
引用
收藏
页码:246 / 257
页数:12
相关论文
共 74 条
[11]   Chemical Probes of Surface Layer Biogenesis in Clostridium difficile [J].
Dang, T. H. Tam ;
de la Riva, Lucia ;
Fagan, Robert P. ;
Storck, Elisabeth M. ;
Heal, William P. ;
Janoir, Claire ;
Fairweather, Neil F. ;
Tate, Edward W. .
ACS CHEMICAL BIOLOGY, 2010, 5 (03) :279-285
[12]   Noninvasive optical imaging of apoptosis by caspase-targeted activity-based probes [J].
Edgington, Laura E. ;
Berger, Alicia B. ;
Blum, Galia ;
Albrow, Victoria E. ;
Paulick, Margot G. ;
Lineberry, Neil ;
Bogyo, Matthew .
NATURE MEDICINE, 2009, 15 (08) :967-U177
[13]   Mechanism-based profiling of enzyme families [J].
Evans, Michael J. ;
Cravatt, Benjamin F. .
CHEMICAL REVIEWS, 2006, 106 (08) :3279-3301
[14]   AUTONOMOUS FUNCTIONAL DOMAINS OF CHEMICALLY SYNTHESIZED HUMAN IMMUNODEFICIENCY VIRUS TAT TRANS-ACTIVATOR PROTEIN [J].
GREEN, M ;
LOEWENSTEIN, PM .
CELL, 1988, 55 (06) :1179-1188
[15]   Proteasome activity profiling: a simple, robust and versatile method revealing subunit-selective inhibitors and cytoplasmic, defense-induced proteasome activities [J].
Gu, Christian ;
Kolodziejek, Izabella ;
Misas-Villamil, Johana ;
Shindo, Takayuki ;
Colby, Tom ;
Verdoes, Martijn ;
Richau, Kerstin H. ;
Schmidt, Juergen ;
Overkleeft, Hermen S. ;
van der Hoorn, Renier A. L. .
PLANT JOURNAL, 2010, 62 (01) :160-170
[16]   N-myristoyl transferase-mediated protein labelling in vivo [J].
Heal, William P. ;
Wickramasinghe, Sasala R. ;
Leatherbarrow, Robin J. ;
Tate, Edward W. .
ORGANIC & BIOMOLECULAR CHEMISTRY, 2008, 6 (13) :2308-2315
[17]   Site-specific N-terminal labelling of proteins in vitro and in vivo using N-myristoyl transferase and bioorthogonal ligation chemistry [J].
Heal, William P. ;
Wickramasinghe, Sasala R. ;
Bowyer, Paul W. ;
Holder, Anthony A. ;
Smith, Deborah F. ;
Leatherbarrow, Robin J. ;
Tate, Edward W. .
CHEMICAL COMMUNICATIONS, 2008, (04) :480-482
[18]   Getting a chemical handle on protein post-translational modification [J].
Heal, William P. ;
Tate, Edward W. .
ORGANIC & BIOMOLECULAR CHEMISTRY, 2010, 8 (04) :731-738
[19]  
Heal William Percy, 2008, Curr Drug Discov Technol, V5, P200, DOI 10.2174/157016308785739866
[20]   Receptor-Mediated Targeting of Cathepsins in Professional Antigen Presenting Cells [J].
Hillaert, Ulrik ;
Verdoes, Martijn ;
Florea, Bogdan I. ;
Saragliadis, Nastasios ;
Habets, Kim L. L. ;
Kuiper, Johan ;
Van Calenbergh, Serge ;
Ossendorp, Ferry ;
van der Marel, Gijsbert A. ;
Driessen, Christoph ;
Overkleeft, Hermen S. .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2009, 48 (09) :1629-1632