Cell fate transitions and the replication timing decision point

被引:30
作者
Gilbert, David M. [1 ]
机构
[1] Florida State Univ, Dept Biol Sci, Tallahassee, FL 32306 USA
关键词
EMBRYONIC STEM-CELLS; GENE-REGULATION; DNA-REPLICATION; NUCLEAR LAMINA; IN-VITRO; EARLY G1; CHROMATIN; GENOME; PHASE; DIFFERENTIATION;
D O I
10.1083/jcb.201007125
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Recent findings suggest that large-scale remodeling of three dimensional (3D) chromatin architecture occurs during a brief period in early G1 phase termed the replication timing decision point (TDP). In this speculative article, I suggest that the TDP may represent an as yet unappreciated window of opportunity for extracellular cues to influence 3D architecture during stem cell fate decisions. I also describe several testable predictions of this hypothesis.
引用
收藏
页码:899 / 903
页数:5
相关论文
共 47 条
[31]   Opinion - Chromatin in pluripotent embryonic stem cells and differentiation [J].
Meshorer, Eran ;
Misteli, Tom .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2006, 7 (07) :540-546
[32]   G1 to S phase cell cycle transition in somatic and embryonic stem cells [J].
Neganova, Irina ;
Lako, Majlinda .
JOURNAL OF ANATOMY, 2008, 213 (01) :30-44
[33]   Initial Genomics of the Human Nucleolus [J].
Nemeth, Attila ;
Conesa, Ana ;
Santoyo-Lopez, Javier ;
Medina, Ignacio ;
Montaner, David ;
Peterfia, Balint ;
Solovei, Irina ;
Cremer, Thomas ;
Dopazo, Joaquin ;
Laengst, Gernot .
PLOS GENETICS, 2010, 6 (03)
[34]   Spatio-temporal organization of DNA replication in murine embryonic stem, primary, and immortalized cells [J].
Panning, MM ;
Gilbert, DM .
JOURNAL OF CELLULAR BIOCHEMISTRY, 2005, 95 (01) :74-82
[35]   Molecular Maps of the Reorganization of Genome-Nuclear Lamina Interactions during Differentiation [J].
Peric-Hupkes, Daan ;
Meuleman, Wouter ;
Pagie, Ludo ;
Bruggeman, Sophia W. M. ;
Solovei, Irina ;
Brugman, Wim ;
Graef, Stefan ;
Flicek, Paul ;
Kerkhoven, Ron M. ;
van Lohuizen, Maarten ;
Reinders, Marcel ;
Wessels, Lodewyk ;
van Steensel, Bas .
MOLECULAR CELL, 2010, 38 (04) :603-613
[36]   Domain-wide regulation of DNA replication timing during mammalian development [J].
Pope, Benjamin D. ;
Hiratani, Ichiro ;
Gilbert, David M. .
CHROMOSOME RESEARCH, 2010, 18 (01) :127-136
[37]   Transcriptional repression mediated by repositioning of genes to the nuclear lamina [J].
Reddy, K. L. ;
Zullo, J. M. ;
Bertolino, E. ;
Singh, H. .
NATURE, 2008, 452 (7184) :243-247
[38]   Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types [J].
Ryba, Tyrone ;
Hiratani, Ichiro ;
Lu, Junjie ;
Itoh, Mari ;
Kulik, Michael ;
Zhang, Jinfeng ;
Schulz, Thomas C. ;
Robins, Allan J. ;
Dalton, Stephen ;
Gilbert, David M. .
GENOME RESEARCH, 2010, 20 (06) :761-770
[39]   Establishment of Histone Modifications after Chromatin Assembly [J].
Scharf, Annette N. D. ;
Barth, Teresa K. ;
Imhof, Axel .
NUCLEIC ACIDS RESEARCH, 2009, 37 (15) :5032-5040
[40]   Epigenetic signatures of stem-cell identity [J].
Spivakov, Mikhail ;
Fisher, Amanda G. .
NATURE REVIEWS GENETICS, 2007, 8 (04) :263-271