The T cell surface - How well do we know it?

被引:28
作者
Evans, EJ
Hene, L
Sparks, LM
Dong, T
Retiere, C
Fennelly, JA
Manso-Sancho, R
Powell, J
Braud, VM
Rowland-Jones, SL
McMichael, AJ
Davis, SJ [1 ]
机构
[1] Univ Oxford, John Radcliffe Hosp, Nuffield Dept Clin Med, Oxford OX3 9DU, England
[2] Univ Oxford, John Radcliffe Hosp, Weatherall Inst Mol Med, Med Res Council Human Immunol Unit, Oxford OX3 9DU, England
[3] St Thomas Hosp, Rayne Inst, Richard Dimbleby Dept Canc Res, Canc Res UK Lab, London SE1 7EH, England
基金
英国惠康基金; 英国医学研究理事会;
关键词
D O I
10.1016/S1074-7613(03)00198-5
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
The overall degree of complexity of the T cell surface has been unclear, constraining our understanding of its biology. Using global gene expression analysis, we show that 111 of 374 genes encoding well-characterized leukocyte surface antigens are expressed by a resting cytotoxic T cell. Unexpectedly, of 97 stringently defined, T cell-specific transcripts with unknown functions that we identify, none encode proteins with the modular architecture characteristic of 80% of leukocyte surface antigens. Only two encode proteins with membrane topologies found exclusively in cell surface molecules. Our analysis indicates that the cell type-specific composition of the resting CD8(+) T cell surface is now largely defined, providing an insight into the overall compositional complexity of the mammalian cell surface and a framework for formulating systematic models of T cell surface-dependent processes, such as T cell receptor triggering.
引用
收藏
页码:213 / 223
页数:11
相关论文
共 45 条
[1]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[2]   InterPro - an integrated documentation resource for protein families, domains and functional sites [J].
Apweiler, R ;
Attwood, TK ;
Bairoch, A ;
Bateman, A ;
Birney, E ;
Biswas, M ;
Bucher, P ;
Cerutti, L ;
Corpet, F ;
Croning, MDR ;
Durbin, R ;
Falquet, L ;
Fleischmann, W ;
Gouzy, J ;
Hermjakob, H ;
Hulo, N ;
Jonassen, I ;
Kahn, D ;
Kanapin, A ;
Karavidopoulou, Y ;
Lopez, R ;
Marx, B ;
Mulder, NJ ;
Oinn, TM ;
Pagni, M ;
Servant, F ;
Sigrist, CJA ;
Zdobnov, EM .
BIOINFORMATICS, 2000, 16 (12) :1145-1150
[3]   The significance of digital gene expression profiles [J].
Audic, S ;
Claverie, JM .
GENOME RESEARCH, 1997, 7 (10) :986-995
[4]  
BARCLAY AN, 1997, LEUCOCYTE ANTIGEN FA, V1
[5]   The value of microarray techniques for quantitative gene profiling in molecular diagnostics [J].
Bustin, SA ;
Dorudi, S .
TRENDS IN MOLECULAR MEDICINE, 2002, 8 (06) :269-272
[6]   The human transcriptome map:: Clustering of highly expressed genes in chromosomal domains [J].
Caron, H ;
van Schaik, B ;
van der Mee, M ;
Baas, F ;
Riggins, G ;
van Sluis, P ;
Hermus, MC ;
van Asperen, R ;
Boon, K ;
Voûte, PA ;
Heisterkamp, S ;
van Kampen, A ;
Versteeg, R .
SCIENCE, 2001, 291 (5507) :1289-+
[7]   The structure and ligand interactions of CD2: Implications for T-cell function [J].
Davis, SJ ;
vanderMerwe, PA .
IMMUNOLOGY TODAY, 1996, 17 (04) :177-187
[8]   The Immunological Synapse: A Molecular Machine Controlling T Cell Activation [J].
Grakoui, Arash ;
Bromley, Shannon K. ;
Sumen, Cenk ;
Davis, Mark M. ;
Shaw, Andrey S. ;
Allen, Paul M. ;
Dustin, Michael L. .
JOURNAL OF IMMUNOLOGY, 2015, 194 (09) :221-227
[9]   Open systems: panoramic views of gene expression [J].
Green, CD ;
Simons, JF ;
Taillon, BE ;
Lewin, DA .
JOURNAL OF IMMUNOLOGICAL METHODS, 2001, 250 (1-2) :67-79
[10]   Correlation between protein and mRNA abundance in yeast [J].
Gygi, SP ;
Rochon, Y ;
Franza, BR ;
Aebersold, R .
MOLECULAR AND CELLULAR BIOLOGY, 1999, 19 (03) :1720-1730