Probing the elusive catalytic activity of vertebrate class IIa histone deacetylases

被引:85
作者
Jones, Philip [1 ]
Altamura, Sergio [1 ]
De Francesco, Aele [1 ]
Gallinari, Paola [1 ]
Lahm, Armin [1 ]
Neddermann, Petra [1 ]
Rowley, Michael [1 ]
Serafini, Sergio [1 ]
Steinkuehler, Christian [1 ]
机构
[1] IRBM, Merck Res Labs, I-00040 Pomezia, Italy
关键词
D O I
10.1016/j.bmcl.2008.02.025
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
It has been widely debated whether class IIa HDACs have catalytic deacetylase activity, and whether this plays any part in controlling gene expression. Herein, it has been demonstrated that class IIa HDACs isolated from mammalian cells are contaminated with other deacetylases, but can be prepared cleanly in Escherichia coli. These bacteria preparations have weak but measurable deacetylase activity. The low efficiency can be restored either by: mutation of an active site histidine to tyrosine, or by the use of a non-acetylated lysine substrate, allowing the development of assays to identify class IIa HDAC inhibitors. (C) 2008 Elsevier Ltd. All rights reserved.
引用
收藏
页码:1814 / 1819
页数:6
相关论文
共 23 条
[1]   The Sir2 family of protein deacetylases [J].
Blander, G ;
Guarente, L .
ANNUAL REVIEW OF BIOCHEMISTRY, 2004, 73 :417-435
[2]   Histone deacetylases 5 and 9 govern responsiveness of the heart to a subset of stress signals and play redundant roles in heart development [J].
Chang, SR ;
McKinsey, TA ;
Zhang, CL ;
Richardson, JA ;
Hill, JA ;
Olson, EN .
MOLECULAR AND CELLULAR BIOLOGY, 2004, 24 (19) :8467-8476
[3]   Lysine propionylation and butyrylation are novel post-translational modifications in histones [J].
Chen, Yue ;
Sprung, Robert ;
Tang, Yi ;
Ball, Haydn ;
Sangras, Bhavani ;
Kim, Sung Chan ;
Falck, John R. ;
Peng, Junmin ;
Gu, Wei ;
Zhao, Yingming .
MOLECULAR & CELLULAR PROTEOMICS, 2007, 6 (05) :812-819
[4]   Acetylation and chromosomal functions [J].
Cheung, WL ;
Briggs, SD ;
Allis, CD .
CURRENT OPINION IN CELL BIOLOGY, 2000, 12 (03) :326-333
[5]   Histone deacetylases (HDACs): characterization of the classical HDAC family [J].
De Ruijter, AJM ;
Van Gennip, AH ;
Caron, HN ;
Kemp, S ;
Van Kuilenburg, ABP .
BIOCHEMICAL JOURNAL, 2003, 370 :737-749
[6]   HDAC7, a thymus-specific class II histone deacetylase, regulates Nur77 transcription and TCR-mediated apoptosis [J].
Dequiedt, F ;
Kasler, H ;
Fischle, W ;
Kiermer, V ;
Weinstein, M ;
Herndier, BG ;
Verdin, E .
IMMUNITY, 2003, 18 (05) :687-698
[7]   Structures of a histone deacetylase homologue bound to the TSA and SAHA inhibitors [J].
Finnin M.S. ;
Donigian J.R. ;
Cohen A. ;
Richon V.M. ;
Rifkind R.A. ;
Marks P.A. ;
Breslow R. ;
Pavletich N.P. .
Nature, 1999, 401 (6749) :188-193
[8]   Enzymatic activity associated with class IIHDACs is dependent on a multiprotein complex containing HDAC3 and SMRT/N-CoR [J].
Fischle, W ;
Dequiedt, F ;
Hendzel, MJ ;
Guenther, MG ;
Lazar, MA ;
Voelter, W ;
Verdin, E .
MOLECULAR CELL, 2002, 9 (01) :45-57
[9]   Human HDAC7 histone deacetylase activity is associated with HDAC3 in vivo [J].
Fischle, W ;
Dequiedt, F ;
Fillion, M ;
Hendzel, MJ ;
Voelter, W ;
Verdin, E .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (38) :35826-35835
[10]   Trifluoromethyl ketones as inhibitors of histone deacetylase [J].
Frey, RR ;
Wada, CK ;
Garland, RB ;
Curtin, ML ;
Michaelides, MR ;
Li, JL ;
Pease, LJ ;
Glaser, KB ;
Marcotte, PA ;
Bouska, JJ ;
Murphy, SS ;
Davidsen, SK .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2002, 12 (23) :3443-3447