Adaptations to Climate-Mediated Selective Pressures in Humans

被引:211
作者
Hancock, Angela M. [1 ]
Witonsky, David B. [1 ]
Alkorta-Aranburu, Gorka [1 ]
Beall, Cynthia M. [2 ]
Gebremedhin, Amha [3 ]
Sukernik, Rem [4 ]
Utermann, Gerd [5 ]
Pritchard, Jonathan K. [1 ,6 ]
Coop, Graham [1 ,7 ,8 ]
Di Rienzo, Anna [1 ]
机构
[1] Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
[2] Case Western Res Univ, Dept Anthropol, Cleveland, OH USA
[3] Univ Addis Ababa, Dept Internal Med, Addis Ababa, Ethiopia
[4] Russian Acad Sci, Lab Human Mol Genet, Dept Mol & Cellular Biol, Inst Chem Biol & Fundamental Med, Novosibirsk, Russia
[5] Med Univ Innsbruck, Inst Med Biol & Human Genet, Innsbruck, Austria
[6] Howard Hughes Med Inst, Chevy Chase, MD USA
[7] Univ Calif Davis, Dept Ecol & Evolut, Davis, CA 95616 USA
[8] Univ Calif Davis, Ctr Populat Biol, Davis, CA 95616 USA
来源
PLOS GENETICS | 2011年 / 7卷 / 04期
关键词
CLEAR-CELL CARCINOMA; RECENT POSITIVE SELECTION; NF-KAPPA-B; NATURAL-SELECTION; LATITUDINAL CLINE; BERGMANNS RULE; HUMAN SKIN; BODY-SIZE; FLOWERING TIME; ANNEXIN-IV;
D O I
10.1371/journal.pgen.1001375
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Humans inhabit a remarkably diverse range of environments, and adaptation through natural selection has likely played a central role in the capacity to survive and thrive in extreme climates. Unlike numerous studies that used only population genetic data to search for evidence of selection, here we scan the human genome for selection signals by identifying the SNPs with the strongest correlations between allele frequencies and climate across 61 worldwide populations. We find a striking enrichment of genic and nonsynonymous SNPs relative to non-genic SNPs among those that are strongly correlated with these climate variables. Among the most extreme signals, several overlap with those from GWAS, including SNPs associated with pigmentation and autoimmune diseases. Further, we find an enrichment of strong signals in gene sets related to UV radiation, infection and immunity, and cancer. Our results imply that adaptations to climate shaped the spatial distribution of variation in humans.
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页数:16
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