The evolving field of imaging mass spectrometry and its impact on future biological research

被引:107
作者
Watrous, Jeramie D. [2 ]
Alexandrov, Theodore [1 ]
Dorrestein, Pieter C. [2 ,3 ,4 ]
机构
[1] Univ Bremen, Ctr Ind Math, Bremen, Germany
[2] Univ Calif San Diego, Dept Pharmacol, Dept Chem & Biochem, La Jolla, CA 92093 USA
[3] Univ Calif San Diego, Skaggs Sch Pharm & Pharmaceut Sci, La Jolla, CA 92093 USA
[4] Univ Calif San Diego, Scripps Inst Oceanog, Ctr Marine Biotechnol, La Jolla, CA 92093 USA
来源
JOURNAL OF MASS SPECTROMETRY | 2011年 / 46卷 / 02期
关键词
imaging mass spectrometry; MALDI; SIMS; DESI; informatics; data mining; spectral processing; IMS public database; LASER-DESORPTION/IONIZATION MALDI; ELECTROSPRAY-IONIZATION DESI; DIRECT TISSUE-ANALYSIS; ATMOSPHERIC-PRESSURE; METABOLIC EXCHANGE; TOF-SIMS; QUANTITATIVE-ANALYSIS; MOLECULAR ANALYSIS; PEAK ALIGNMENT; ION;
D O I
10.1002/jms.1876
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Within the past decade, imaging mass spectrometry (IMS) has been increasingly recognized as an indispensable technique for studying biological systems. Its rapid evolution has resulted in an impressive array of instrument variations and sample applications, yet the tools and data are largely confined to specialists. It is therefore important that at this junction the IMS community begin to establish IMS as a permanent fixture in life science research thereby making the technology and/or the data approachable by non-mass spectrometrists, leading to further integration into biological and clinical research. In this perspective article, we provide insight into the evolution and current state of IMS and propose some of the directions that IMS could develop in order to stay on course to become one of the most promising new tools in life science research. Copyright (C) 2011 John Wiley & Sons, Ltd.
引用
收藏
页码:209 / 222
页数:14
相关论文
共 138 条
[1]   The correspondence problem for metabonomics datasets [J].
Aberg, K. Magnus ;
Alm, Erik ;
Torgrip, Ralf J. O. .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2009, 394 (01) :151-162
[2]   Spatial Segmentation of Imaging Mass Spectrometry Data with Edge-Preserving Image Denoising and Clustering [J].
Alexandrov, Theodore ;
Becker, Michael ;
Deininger, Soren-Oliver ;
Ernst, Gunther ;
Wehder, Liane ;
Grasmair, Markus ;
von Eggeling, Ferdinand ;
Thiele, Herbert ;
Maass, Peter .
JOURNAL OF PROTEOME RESEARCH, 2010, 9 (12) :6535-6546
[3]   Biomarker discovery in MALDI-TOF serum protein profiles using discrete wavelet transformation [J].
Alexandrov, Theodore ;
Decker, Jens ;
Mertens, Bart ;
Deelder, Andre M. ;
Tollenaar, Rob A. E. M. ;
Maass, Peter ;
Thiele, Herbert .
BIOINFORMATICS, 2009, 25 (05) :643-649
[4]   Lipid imaging in the zebra finch brain with secondary ion mass spectrometry [J].
Amaya, Kensey R. ;
Monroe, Eric B. ;
Sweedler, Jonathan V. ;
Clayton, David F. .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2007, 260 (2-3) :121-127
[5]   Examination of the distribution of nicosulfuron in sunflower plants by matrix-assisted laser desorption/ionisation mass spectrometry imaging [J].
Anderson, David M. G. ;
Carolan, Vikki A. ;
Crosland, Susan ;
Sharples, Kate R. ;
Clench, Malcolm R. .
RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 2009, 23 (09) :1321-1327
[6]  
[Anonymous], 1988, Rapid Commun. Mass Spectrom, DOI [DOI 10.1002/RCM.1290020802, 10.1002/rcm.1290020802]
[7]   What can metabolomics learn from genomics and proteomics? [J].
Arita, Masanori .
CURRENT OPINION IN BIOTECHNOLOGY, 2009, 20 (06) :610-615
[8]   Depth profiling of fingerprint and ink signals by SIMS and MeV SIMS [J].
Bailey, M. J. ;
Jones, B. N. ;
Hinder, S. ;
Watts, J. ;
Bleay, S. ;
Webb, R. P. .
NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION B-BEAM INTERACTIONS WITH MATERIALS AND ATOMS, 2010, 268 (11-12) :1929-1932
[9]   Identification of Biological Tissues by Rapid Evaporative Ionization Mass Spectrometry [J].
Balog, Julia ;
Szaniszlo, Tamas ;
Schaefer, Karl-Christian ;
Denes, Julia ;
Lopata, Antal ;
Godorhazy, Lajos ;
Szalay, Daniel ;
Balogh, Lajos ;
Sasi-Szabo, Laszlo ;
Toth, Mikos ;
Takats, Zoltan .
ANALYTICAL CHEMISTRY, 2010, 82 (17) :7343-7350
[10]   Automated MALDI matrix deposition method with inkjet printing for imaging mass spectrometry [J].
Baluya, Dodge L. ;
Garrett, Timothy J. ;
Yost, Richard A. .
ANALYTICAL CHEMISTRY, 2007, 79 (17) :6862-6867