dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa

被引：29

作者：

Gaudet, Pascale

Fey, Petra

Basu, Siddhartha

Bushmanova, Yulia A.

Dodson, Robert

Sheppard, Kerry A.

Just, Eric M.

Kibbe, Warren A.

Chisholm, Rex L. ^{[1
]}

机构：

[1] Northwestern Univ, Biomed Informat Ctr, Chicago, IL 60611 USA

来源：

NUCLEIC ACIDS RESEARCH | 2011年 / 39卷

基金：

美国国家卫生研究院;

关键词：

DATABASE;

D O I：

10.1093/nar/gkq1103

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

dictyBase (http://www.dictybase.org), the model organism database for Dictyostelium, aims to provide the broad biomedical research community with well integrated, high quality data and tools for Dictyostelium discoideum and related species. dictyBase houses the complete genome sequence, ESTs, and the entire body of literature relevant to Dictyostelium. This information is curated to provide accurate gene models and functional annotations, with the goal of fully annotating the genome to provide a 'reference genome' in the Amoebozoa clade. We highlight several new features in the present update: (i) new annotations; (ii) improved interface with web 2.0 functionality; (iii) the initial steps towards a genome portal for the Amoebozoa; (iv) ortholog display; and (v) the complete integration of the Dicty Stock Center with dictyBase.

引用

页码：D620 / D624

页数：5

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