HIV-1 viral load determination based on reverse transcriptase activity recovered from human plasma

被引:45
作者
Malmsten, A
Shao, XW
Aperia, K
Corrigan, GE
Sandström, E
Kallander, CFR
Leitner, T
Gronowitz, JS
机构
[1] Cavidi Tech AB, SE-75183 Uppsala, Sweden
[2] Uppsala Univ, Dept Genet & Pathol, Uppsala, Sweden
[3] Karolinska Inst, Ctr Microbiol & Tumor Biol, Stockholm, Sweden
[4] Swedish Inst Infect Dis Control, Dept Virol, Stockholm, Sweden
[5] Soder Sjukhuset, S-10064 Stockholm, Sweden
关键词
HIV-1 reverse transcriptase; HIV viremia; viral load; monitoring HIV infection; RT purification; polymerase inactivation;
D O I
10.1002/jmv.10492
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
We describe a procedure (ExaVir(TM) Load) to carry out human immunodeficiency virus-1 (HIV-1) viral load testing using reverse transcriptase (RT) recovered from HIV-1 virions in plasma. Samples from individuals infected with HIV-1 were treated with a sulphydryl-reactive agent to inactivate endogenous polymerases. Virions were then immobilised on a gel and washed in individual mini columns to remove RT-inhibiting antibodies, antiviral drugs, and other RT inhibitors. Immobilised virions were lysed finally, and the viral RT eluted. The amount of RT recovered was quantified by a sensitive RT activity assay using either colorimetry or fluorimetry to detect DNA produced by RT. The "RT load" values of 390 samples from 302 HIV-1 patients living in Sweden were compared to results obtained with an HIV-1 RNA viral load assay. The correlation between the two tests was r = 0.90, P < 0.0001. Four of 202 samples from healthy blood donors gave low positive values in the RT test. All samples in a panel with 10 HIV-1 subtypes were positive by the RT load. The RT load test provides a technically less demanding and cost-effective alternative to methods based on nucleic acid amplification. Being insensitive to genetic drift occurring in HIV, the assay should be of particular use in resource-limited settings, where different subtypes and recombinant HIV strains occur.
引用
收藏
页码:347 / 359
页数:13
相关论文
共 33 条
[1]   Similar rate of disease progression among individuals infected with HIV-1 genetic subtypes A-D [J].
Alaeus, A ;
Lidman, K ;
Björkman, A ;
Giesecke, J ;
Albert, J .
AIDS, 1999, 13 (08) :901-907
[2]   Subtype-specific problems with quantification of plasma HIV-1 RNA [J].
Alaeus, A ;
Lidman, K ;
Sonnerborg, A ;
Albert, J .
AIDS, 1997, 11 (07) :859-865
[3]   Underevaluation of HIV-1 plasma viral load by a commercially available assay in a cluster of patients infected with HIV-1 A/G circulating recombinant form (CRF02) [J].
Amendola, A ;
Bordi, L ;
Angeletti, C ;
Visco-Comandini, U ;
Abbate, I ;
Cappiello, G ;
Budabbus, MA ;
Eljhawi, OA ;
Mehabresh, MI ;
Girardi, E ;
Antinori, A ;
Ippolito, G ;
Capobianchi, MR .
JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES, 2002, 31 (05) :488-494
[4]   Measurement of levels of human immunodeficiency virus type 1 reverse transcriptase (RT) and RT activity-blocking antibody in human serum by a new standardized colorimetric assay [J].
Awad, RJK ;
Corrigan, GE ;
Ekstrand, DHL ;
Thorstensson, R ;
Kallander, CFR ;
Gronowitz, JS .
JOURNAL OF CLINICAL MICROBIOLOGY, 1997, 35 (05) :1080-1089
[5]   FELINE IMMUNODEFICIENCY VIRUS - AN INTERESTING MODEL FOR AIDS STUDIES AND AN IMPORTANT CAT PATHOGEN [J].
BENDINELLI, M ;
PISTELLO, M ;
LOMBARDI, S ;
POLI, A ;
GARZELLI, C ;
MATTEUCCI, D ;
CECCHERININELLI, L ;
MALVALDI, G ;
TOZZINI, F .
CLINICAL MICROBIOLOGY REVIEWS, 1995, 8 (01) :87-112
[6]   A new quantitative HIV load assay based on plasma virion reverse transcriptase activity for the different types, groups and subtypes [J].
Braun, J ;
Plantier, JC ;
Hellot, MF ;
Tuaillon, E ;
Gueudin, M ;
Damond, F ;
Malmsten, A ;
Corrigan, GE ;
Simon, F .
AIDS, 2003, 17 (03) :331-336
[7]  
Bürgisser P, 2000, J ACQ IMMUN DEF SYND, V23, P138
[8]   SUSCEPTIBILITIES OF HUMAN-IMMUNODEFICIENCY-VIRUS TYPE-1 ENZYME AND VIRAL VARIANTS EXPRESSING MULTIPLE RESISTANCE-ENGENDERING AMINO-ACID SUBSTITUTIONS TO REVERSE-TRANSCRIPTASE INHIBITORS [J].
BYRNES, VW ;
EMINI, EA ;
SCHLEIF, WA ;
CONDRA, JH ;
SCHNEIDER, CL ;
LONG, WJ ;
WOLFGANG, JA ;
GRAHAM, DJ ;
GOTLIB, L ;
SCHLABACH, AJ ;
WOLANSKI, BS ;
BLAHY, OM ;
QUINTERO, JC ;
RHODES, A ;
ROTH, E ;
TITUS, DL ;
SARDANA, VV .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 1994, 38 (06) :1404-1407
[9]   Differences in reverse transcriptase activity versus p24 antigen detection in cell culture, when comparing a homogeneous group of HIV type 1 subtype B viruses with a heterogeneous group of divergent strains [J].
Corrigan, GE ;
Al-Khalili, L ;
Malmsten, A ;
Thorstensson, R ;
Fenyö, EM ;
Källander, CFR ;
Gronowitz, JS .
AIDS RESEARCH AND HUMAN RETROVIRUSES, 1998, 14 (04) :347-352
[10]  
Coste J, 1996, J MED VIROL, V50, P293, DOI 10.1002/(SICI)1096-9071(199612)50:4&lt