A new lysozyme fold -: Crystal structure of the muramidase from Streptomyces coelicolor at 1.65 Å resolution

被引:55
作者
Rau, A
Hogg, T
Marquardt, R
Hilgenfeld, R
机构
[1] Inst Mol Biotechnol, Dept Struct Biol & Crystallog, D-07745 Jena, Germany
[2] Dechema EV, Dept Biotechnol, D-60486 Frankfurt, Germany
关键词
D O I
10.1074/jbc.M102591200
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cellosyl is a bacterial muramidase from Streptomyces coelicolor. Similar to other lysozymes, the enzyme cleaves the beta -1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine units, but it also exhibits a beta -1,4-N,6-O-diacetylmuramidase activity. The latter enables Cellosyl to degrade the cell walls of Staphylococcus aureus, which are not hydrolyzed by chicken-, goose-, or bacteriophage T4-type lysozymes. The enzymatic activity and amino acid sequence of Cellosyl group it with lysozymes of the Chalaropsis type, for which no detailed structural information has been available so far. The crystal structure of Cellosyl from S. coelicolor has been determined to a resolution of 1.65 Angstrom and refined to an R-factor of 15.2%. The enzyme is comprised of a single domain and possesses an unusual beta/alpha -barrel fold. The last strand, beta8, of the (beta/alpha)(5)beta (3)-barrel is found to be antiparallel to strands beta7 and beta1. Asp-9, Asp-98, and Glu-100 are located at the active site. The structure of Cellosyl exhibits a new lysozyme fold and represents a new class of polysaccharide-hydrolyzing beta/alpha -barrels.
引用
收藏
页码:31994 / 31999
页数:6
相关论文
共 39 条
[21]  
JOLLES P, 1984, MOL CELL BIOCHEM, V63, P165
[22]   IMPROVED METHODS FOR BUILDING PROTEIN MODELS IN ELECTRON-DENSITY MAPS AND THE LOCATION OF ERRORS IN THESE MODELS [J].
JONES, TA ;
ZOU, JY ;
COWAN, SW ;
KJELDGAARD, M .
ACTA CRYSTALLOGRAPHICA SECTION A, 1991, 47 :110-119
[23]   MOLSCRIPT - A PROGRAM TO PRODUCE BOTH DETAILED AND SCHEMATIC PLOTS OF PROTEIN STRUCTURES [J].
KRAULIS, PJ .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1991, 24 :946-950
[24]   PROCHECK - A PROGRAM TO CHECK THE STEREOCHEMICAL QUALITY OF PROTEIN STRUCTURES [J].
LASKOWSKI, RA ;
MACARTHUR, MW ;
MOSS, DS ;
THORNTON, JM .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1993, 26 :283-291
[25]  
LEBIODA L, 1989, J BIOL CHEM, V264, P3685
[26]  
LYNE JE, 1990, J BIOL CHEM, V265, P6928
[27]   SOLVENT CONTENT OF PROTEIN CRYSTALS [J].
MATTHEWS, BW .
JOURNAL OF MOLECULAR BIOLOGY, 1968, 33 (02) :491-+
[28]   Raster3D: Photorealistic molecular graphics [J].
Merritt, EA ;
Bacon, DJ .
MACROMOLECULAR CRYSTALLOGRAPHY, PT B, 1997, 277 :505-524
[29]   PURIFICATION AND CHARACTERIZATION OF LYSOZYME PRODUCED BY STREPTOMYCES-ERYTHRAEUS [J].
MORITA, T ;
HARA, S ;
MATSUSHIMA, Y .
JOURNAL OF BIOCHEMISTRY, 1978, 83 (03) :893-903
[30]   PROTEIN FOLDING AND ASSOCIATION - INSIGHTS FROM THE INTERFACIAL AND THERMODYNAMIC PROPERTIES OF HYDROCARBONS [J].
NICHOLLS, A ;
SHARP, KA ;
HONIG, B .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 1991, 11 (04) :281-296