ArrayExpress update-an archive of microarray and high-throughput sequencing-based functional genomics experiments

被引:234
作者
Parkinson, Helen [1 ]
Sarkans, Ugis [1 ]
Kolesnikov, Nikolay [1 ]
Abeygunawardena, Niran [1 ]
Burdett, Tony [1 ]
Dylag, Miroslaw [1 ]
Emam, Ibrahim [1 ]
Farne, Anna [1 ]
Hastings, Emma [1 ]
Holloway, Ele [1 ]
Kurbatova, Natalja [1 ]
Lukk, Margus [2 ]
Malone, James [1 ]
Mani, Roby [1 ]
Pilicheva, Ekaterina [1 ]
Rustici, Gabriella [1 ]
Sharma, Anjan [1 ]
Williams, Eleanor [1 ]
Adamusiak, Tomasz [1 ]
Brandizi, Marco [1 ]
Sklyar, Nataliya [1 ]
Brazma, Alvis [1 ]
机构
[1] EMBL EBI, Funct Genom Team, Hinxton CB10 1SD, England
[2] Li Ka Shing Ctr, Canc Res UK Cambridge Res Inst, Regulatory Syst Biol Lab, Cambridge CB2 0RE, England
基金
美国国家卫生研究院;
关键词
MAGE-TAB; FORMAT;
D O I
10.1093/nar/gkq1040
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The ArrayExpress Archive (http://www.ebi.ac.uk/arrayexpress) is one of the three international public repositories of functional genomics data supporting publications. It includes data generated by sequencing or array-based technologies. Data are submitted by users and imported directly from the NCBI Gene Expression Omnibus. The ArrayExpress Archive is closely integrated with the Gene Expression Atlas and the sequence databases at the European Bioinformatics Institute. Advanced queries provided via ontology enabled interfaces include queries based on technology and sample attributes such as disease, cell types and anatomy.
引用
收藏
页码:D1002 / D1004
页数:3
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