Molecular spiders with memory

被引:28
作者
Antal, Tibor [1 ]
Krapivsky, P. L.
机构
[1] Harvard Univ, Program Evolut Dynam, Cambridge, MA 02138 USA
[2] Boston Univ, Dept Phys, Boston, MA 02215 USA
[3] Boston Univ, Ctr Mol Cybernet, Boston, MA 02215 USA
来源
PHYSICAL REVIEW E | 2007年 / 76卷 / 02期
关键词
D O I
10.1103/PhysRevE.76.021121
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
Synthetic biomolecular spiders with "legs" made of single-stranded segments of DNA can move on a surface which is also covered by single-stranded segments of DNA complementary to the leg DNA. In experimental realizations, when a leg detaches from a segment of the surface for the first time it alters that segment, and legs subsequently bind to these altered segments more weakly. Inspired by these experiments, we investigate spiders moving along a one-dimensional substrate, whose legs leave newly visited sites at a slower rate than revisited sites. For a random walk (one-leg spider), the slowdown does not affect the long time behavior. For a bipedal spider, however, the slowdown generates an effective bias toward unvisited sites, and the spider behaves similarly to the excited walk. Surprisingly, the slowing down of the spider at new sites increases the diffusion coefficient and accelerates the growth of the number of visited sites.
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页数:9
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