Packed capillary reversed-phase liquid chromatography with high-performance electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry for proteomics

被引:208
作者
Shen, YF [1 ]
Zhao, R [1 ]
Belov, ME [1 ]
Conrads, TP [1 ]
Anderson, GA [1 ]
Tang, KQ [1 ]
Pasa-Tolic, L [1 ]
Veenstra, TD [1 ]
Lipton, MS [1 ]
Udseth, HR [1 ]
Smith, RD [1 ]
机构
[1] Pacific NW Natl Lab, Environm Mol Sci Lab, Richland, WA 99352 USA
关键词
D O I
10.1021/ac0011336
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
In this study, high-efficiency packed capillary reversed-phase liquid chromatography (RPLC) coupled on-line with high-performance Fourier transform ion cyclotron resonance (FTICR) mass spectrometry has been investigated for the characterization of complex cellular proteolytic digests. Long capillary columns (80-cm) packed with small (3-mum) C18 bonded particles provided a total peak capacity of similar to 1000 for cellular proteolytic polypeptides when interfaced with an ESI-FTICR mass spectrometer under composition gradient conditions at a pressure of 10 000 psi, Large quantities of cellular proteolytic digests (e.g,, 500 mug) could be loaded onto packed capillaries of 150-mum inner diameter without a significant loss of separation efficiency. Precolumns with suitable inner diameters were found useful for improving the elution reproducibility without a significant loss of separation quality. Porous particle packed capillaries were found to provide better results than those containing nonporous particles because of their higher sample capacity. Two-dimensional analyses from the combination of packed capillary RPLC with high-resolution FTICR yield a combined capacity for separations of >1 million polypeptide components and simultaneously provided information for the identification of the separated components based upon the accurate mass tag concept previously described.
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收藏
页码:1766 / 1775
页数:10
相关论文
共 51 条
[1]  
Abian J, 1999, J MASS SPECTROM, V34, P244, DOI 10.1002/(SICI)1096-9888(199904)34:4<244::AID-JMS775>3.0.CO
[2]  
2-0
[3]   Programmed ribosomal frameshifting: Much ado about knotting! [J].
Alam, SL ;
Atkins, JF ;
Gesteland, RF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (25) :14177-14179
[4]   Proteome and proteomics: New technologies, new concepts, and new words [J].
Anderson, NL ;
Anderson, NG .
ELECTROPHORESIS, 1998, 19 (11) :1853-1861
[5]   PREPARATION AND EVALUATION OF SLURRY-PACKED CAPILLARY COLUMNS FOR NORMAL-PHASE LIQUID-CHROMATOGRAPHY [J].
ANDREOLINI, F ;
BORRA, C ;
NOVOTNY, M .
ANALYTICAL CHEMISTRY, 1987, 59 (19) :2428-2432
[6]  
Belov ME, 2000, J AM SOC MASS SPECTR, V11, P19, DOI 10.1016/S1044-0305(99)00121-X
[7]   Zeptomole-sensitivity electrospray ionization - Fourier transform ion cyclotron resonance mass spectrometry of proteins [J].
Belov, ME ;
Gorshkov, MV ;
Udseth, HR ;
Anderson, GA ;
Smith, RD .
ANALYTICAL CHEMISTRY, 2000, 72 (10) :2271-2279
[8]   Electrospray ionization-Fourier transform ion cyclotron mass spectrometry using ion preselection and external accumulation for ultrahigh sensitivity [J].
Belov, ME ;
Nikolaev, EN ;
Anderson, GA ;
Auberry, KJ ;
Harkewicz, R ;
Smith, RD .
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2001, 12 (01) :38-48
[9]   ''Colored'' noise waveforms and quadrupole excitation for the dynamic range expansion of Fourier transform ion cyclotron resonance mass spectrometry [J].
Bruce, JE ;
Anderson, GA ;
Smith, RD .
ANALYTICAL CHEMISTRY, 1996, 68 (03) :534-541
[10]   High mass-measurement accuracy and 100% sequence coverage of enzymatically digested bovine serum albumin from an ESI-FTICR mass spectrum [J].
Bruce, JE ;
Anderson, GA ;
Wen, J ;
Harkewicz, R ;
Smith, RD .
ANALYTICAL CHEMISTRY, 1999, 71 (14) :2595-2599