Characterization of Dysregulated miRNA in Peripheral Blood Mononuclear Cells from Ischemic Stroke Patients

被引:40
作者
Bam, Marpe [1 ]
Yang, Xiaoming [1 ]
Sen, Souvik [2 ]
Zumbrun, Elizabeth E. [1 ]
Dennis, Lauren [2 ]
Zhang, Jiajia [3 ]
Nagarkatti, Prakash S. [1 ]
Nagarkatti, Mitzi [1 ,2 ]
机构
[1] Univ South Carolina, Sch Med, Dept Pathol Microbiol & Immunol, Columbia, SC 29209 USA
[2] Univ South Carolina, Sch Med, Dept Neurol, Columbia, SC 29203 USA
[3] Univ South Carolina, Arnold Sch Publ Hlth, Dept Epidemiol & Biostat, Columbia, SC 29206 USA
基金
美国国家卫生研究院;
关键词
Ischemic stroke; miRNA; PBMCs; Inflammation; CHRONIC LYMPHOCYTIC-LEUKEMIA; CIRCULATING MICRORNAS; POTENTIAL BIOMARKERS; GENE-EXPRESSION; EARLY-DIAGNOSIS; PATHOGENESIS; INJURY; IDENTIFICATION; INFLAMMATION; INHIBITION;
D O I
10.1007/s12035-016-0347-8
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Epigenetic modification may play an important role in pathophysiology of ischemic stroke (IS) risk. MicroRNAs (miRNAs), which constitute one of the modes of epigenetic regulation, have been shown to be associated with a number of clinical disorders including IS. The purpose of this study was to investigate the miRNA profile in the peripheral blood mononuclear cells (PBMCs) of IS patients and compare it with stroke-free controls. Blood samples were obtained from 19 healthy age-gender-race matched individuals who served as controls to 20 IS patients. miRNA microarray analysis with RNA from PBMCs was performed and significantly dysregulated miRNAs common among IS patients were identified. We identified 117 miRNAs with linear fold values of at least +/- 1.5, of which, 29 were significantly altered (p value < 0.05). Ingenuity Pathway Analysis (IPA) indicated a role for the dysregulated miRNAs in conditions relevant to IS (e.g., organismal injury and abnormalities, hematological disease and immunological disease). Pro-inflammatory genes like STAT3, interleukin (IL) 12A, and IL12B were some of the highly predicted targets for the dysregulated miRNAs. Notably, we further identified three common and significantly upregulated miRNAs (hsa-miR-4656, -432, -503) and one downregulated miRNA (hsa-miR-874) among all IS patients. Molecular interactive network analysis revealed that the commonly dysregulated miRNAs share several targets with roles relevant to IS. Altogether, we report dysregulation of miRNAs in IS PBMCs and provide evidence for their involvement in the immune system alteration during IS pathophysiology.
引用
收藏
页码:1419 / 1429
页数:11
相关论文
共 52 条
  • [1] CLASSIFICATION OF SUBTYPE OF ACUTE ISCHEMIC STROKE - DEFINITIONS FOR USE IN A MULTICENTER CLINICAL-TRIAL
    ADAMS, HP
    BENDIXEN, BH
    KAPPELLE, LJ
    BILLER, J
    LOVE, BB
    GORDON, DL
    MARSH, EE
    KASE, CS
    WOLF, PA
    BABIKIAN, VL
    LICATAGEHR, EE
    ALLEN, N
    BRASS, LM
    FAYAD, PB
    PAVALKIS, FJ
    WEINBERGER, JM
    TUHRIM, S
    RUDOLPH, SH
    HOROWITZ, DR
    BITTON, A
    MOHR, JP
    SACCO, RL
    CLAVIJO, M
    ROSENBAUM, DM
    SPARR, SA
    KATZ, P
    KLONOWSKI, E
    CULEBRAS, A
    CAREY, G
    MARTIR, NI
    FICARRA, C
    HOGAN, EL
    CARTER, T
    GURECKI, P
    MUNTZ, BK
    RAMIREZLASSEPAS, M
    TULLOCH, JW
    QUINONES, MR
    MENDEZ, M
    ZHANG, SM
    ALA, T
    JOHNSTON, KC
    ANDERSON, DC
    TARREL, RM
    NANCE, MA
    BUDLIE, SR
    DIERICH, M
    HELGASON, CM
    HIER, DB
    SHAPIRO, RA
    [J]. STROKE, 1993, 24 (01) : 35 - 41
  • [2] The functions of animal microRNAs
    Ambros, V
    [J]. NATURE, 2004, 431 (7006) : 350 - 355
  • [3] MicroRNAs: Target Recognition and Regulatory Functions
    Bartel, David P.
    [J]. CELL, 2009, 136 (02) : 215 - 233
  • [4] MicroRNAs: Genomics, biogenesis, mechanism, and function (Reprinted from Cell, vol 116, pg 281-297, 2004)
    Bartel, David P.
    [J]. CELL, 2007, 131 (04) : 11 - 29
  • [5] Cytokine Response Is Determined by Duration of Receptor and Signal Transducers and Activators of Transcription 3 (STAT3) Activation
    Braun, David A.
    Fribourg, Miguel
    Sealfon, Stuart C.
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2013, 288 (05) : 2986 - 2993
  • [6] Centers for Disease Control and Prevention (CDC), 2002, MMWR Morb Mortal Wkly Rep, V51, P429
  • [7] TRIM28 prevents autoinflammatory T cell development in vivo
    Chikuma, Shunsuke
    Suita, Naomasa
    Okazaki, Il-Mi
    Shibayama, Shiro
    Honjo, Tasuku
    [J]. NATURE IMMUNOLOGY, 2012, 13 (06) : 596 - +
  • [8] Retroviral insertional activation of the Fli-3 locus in erythroleukemias encoding a cluster of microRNAs that convert Epo-induced differentiation to proliferation
    Cui, Jiu-Wei
    Li, You-Jun
    Sarkar, Aloke
    Brown, Jeremy
    Tan, Ye-Hui
    Premyslova, Marina
    Michaud, Crystal
    Iscove, Norman
    Wang, Guan-Jun
    Ben-David, Yaacov
    [J]. BLOOD, 2007, 110 (07) : 2631 - 2640
  • [9] STROKE RISK PROFILE - ADJUSTMENT FOR ANTIHYPERTENSIVE MEDICATION - THE FRAMINGHAM-STUDY
    DAGOSTINO, RB
    WOLF, PA
    BELANGER, AJ
    KANNEL, WB
    [J]. STROKE, 1994, 25 (01) : 40 - 43
  • [10] Aging Causes Collateral Rarefaction and Increased Severity of Ischemic Injury in Multiple Tissues
    Faber, James E.
    Zhang, Hua
    Lassance-Soares, Roberta M.
    Prabhakar, Pranay
    Najafi, Amir H.
    Burnett, Mary Susan
    Epstein, Stephen E.
    [J]. ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, 2011, 31 (08) : 1748 - U103