ZFIN: enhancements and updates to the zebrafish model organism database

被引：174

作者：

Bradford, Yvonne ^{[1
]}

Conlin, Tom ^{[1
]}

Dunn, Nathan ^{[1
]}

Fashena, David ^{[1
]}

Frazer, Ken ^{[1
]}

Howe, Douglas G. ^{[1
]}

Knight, Jonathan ^{[1
]}

Mani, Prita ^{[1
]}

Martin, Ryan ^{[1
]}

Moxon, Sierra A. T. ^{[1
]}

Paddock, Holly ^{[1
]}

Pich, Christian ^{[1
]}

Ramachandran, Sridhar ^{[1
]}

Ruef, Barbara J. ^{[1
]}

Ruzicka, Leyla ^{[1
]}

Schaper, Holle Bauer ^{[1
]}

Schaper, Kevin ^{[1
]}

Shao, Xiang ^{[1
]}

Singer, Amy ^{[1
]}

Sprague, Judy ^{[1
]}

Sprunger, Brock ^{[1
]}

Van Slyke, Ceri ^{[1
]}

Westerfield, Monte ^{[1
]}

机构：

[1] ZFIN, Eugene, OR 97403 USA

来源：

NUCLEIC ACIDS RESEARCH | 2011年 / 39卷

基金：

美国国家卫生研究院;

关键词：

ONTOLOGY;

D O I：

10.1093/nar/gkq1077

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

ZFIN, the Zebrafish Model Organism Database, http://zfin.org, serves as the central repository and web-based resource for zebrafish genetic, genomic, phenotypic and developmental data. ZFIN manually curates comprehensive data for zebrafish genes, phenotypes, genotypes, gene expression, antibodies, anatomical structures and publications. A wide-ranging collection of web-based search forms and tools facilitates access to integrated views of these data promoting analysis and scientific discovery. Data represented in ZFIN are derived from three primary sources: curation of zebrafish publications, individual research laboratories and collaborations with bioinformatics organizations. Data formats include text, images and graphical representations. ZFIN is a dynamic resource with data added daily as part of our ongoing curation process. Software updates are frequent. Here, we describe recent additions to ZFIN including (i) enhanced access to images, (ii) genomic features, (iii) genome browser, (iv) transcripts, (v) antibodies and (vi) a community wiki for protocols and antibodies.

引用

页码：D822 / D829

页数：8

共 9 条

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