Online immunoaffinity LC/MS/MS. A general method to increase sensitivity and specificity: How do you do it and what do you need?

被引:25
作者
Dufield, Dawn R. [1 ]
Radabaugh, Melissa R. [2 ]
机构
[1] Pfizer Global Res & Dev, Andover, MA 01810 USA
[2] Sigma Aldrich, St Louis, MO 63103 USA
关键词
Immunoaffinity LC/MS/MS; Protein quantitation (SISCAPA); Antibody enrichment; Online SPE; Triple quadrupole; IA-LC/MRM; SPECTROMETRY-BASED QUANTIFICATION; MASS-SPECTROMETRY; PROTEIN BIOMARKERS; BIOLOGICAL-FLUIDS; DIGESTION; EFFICIENT; QUANTITATION; ENRICHMENT; SEPARATION; PROTEOMICS;
D O I
10.1016/j.ymeth.2011.08.012
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
There is an increased emphasis on hyphenated techniques such as immunoaffinity LC/MS/MS (IA-LC/MS/MS) or IA-LC/MRM. These techniques offer competitive advantages with respect to sensitivity and selectivity over traditional LC/MS and are complementary to ligand binding assays (LBA) or ELISA's. However, these techniques are not entirely straightforward and there are several tips and tricks to routine sample analysis. We describe here our methods and procedures for how to perform online IA-LC/MS/MS including a detailed protocol for the preparation of antibody (Ab) enrichment columns. We have included sample trapping and Ab methods. Furthermore, we highlight tips, tricks, minimal and optimal approaches. This technology has been shown to be viable for several applications, species and fluids from small molecules to proteins and biomarkers to PK assays. (C) 2011 Elsevier Inc. All rights reserved.
引用
收藏
页码:236 / 245
页数:10
相关论文
共 22 条
[1]   Coupling immunoaffinity techniques with MS for quantitative analysis of low-abundance protein biomarkers [J].
Ackermann, Bradley L. ;
Berna, Michael J. .
EXPERT REVIEW OF PROTEOMICS, 2007, 4 (02) :175-186
[2]   Hybrid immunoaffinity-mass spectrometric methods for efficient protein biomarker verification in pharmaceutical development [J].
Ackermann, Bradley L. .
BIOANALYSIS, 2009, 1 (02) :265-268
[3]   Efficient protein digestion with peptide separation in a micro-device interfaced to electrospray mass spectrometry [J].
Al-Lawati, H ;
Watts, P ;
Welham, KJ .
ANALYST, 2006, 131 (05) :656-663
[4]   Mass spectrometric quantitation of peptides and proteins using stable isotope standards and capture by anti-peptide antibodies (SISCAPA) [J].
Anderson, NL ;
Anderson, NG ;
Haines, LR ;
Hardie, DB ;
Olafson, RW ;
Pearson, TW .
JOURNAL OF PROTEOME RESEARCH, 2004, 3 (02) :235-244
[5]   Isotope-labeled protein standards [J].
Brun, Virginie ;
Dupuis, Alain ;
Adrait, Annie ;
Marcellin, Marlene ;
Thomas, Damien ;
Court, Magali ;
Vandenesch, Francois ;
Garin, Jerome .
MOLECULAR & CELLULAR PROTEOMICS, 2007, 6 (12) :2139-2149
[6]   Protein Quantitation through Targeted Mass Spectrometry: The Way Out of Biomarker Purgatory? [J].
Carr, Steven A. ;
Anderson, Leigh .
CLINICAL CHEMISTRY, 2008, 54 (11) :1749-1752
[7]   A proteomics strategy for the enrichment of receptor-associated complexes [J].
Cross, M ;
Nguyen, T ;
Bogdanoska, V ;
Reynolds, E ;
Hamilton, JA .
PROTEOMICS, 2005, 5 (18) :4754-4763
[8]   An immunoaffinity liquid chromatography-tandem mass spectrometry assay for detection of endogenous aggrecan fragments in biological fluids: Use as a biomarker for aggrecanase activity and cartilage degradation [J].
Dufield, D. R. ;
Nemirovskiy, O. V. ;
Jennings, M. G. ;
Tortorella, M. D. ;
Malfait, A. M. ;
Mathews, W. R. .
ANALYTICAL BIOCHEMISTRY, 2010, 406 (02) :113-123
[9]   Bioanalysis of recombinant proteins and antibodies by mass spectrometry [J].
Ezan, Eric ;
Dubois, Mathieu ;
Becher, Francois .
ANALYST, 2009, 134 (05) :825-834
[10]   Quantitative proteome analysis using differential stable isotopic labeling and microbore LC-MALDI MS and MS/MS [J].
Ji, CJ ;
Li, L .
JOURNAL OF PROTEOME RESEARCH, 2005, 4 (03) :734-742