In Vitro Enzymology of Cas9

被引:84
作者
Anders, Carolin [1 ]
Jinek, Martin [1 ]
机构
[1] Univ Zurich, Dept Biochem, Zurich, Switzerland
来源
USE OF CRISPR/CAS9, ZFNS, AND TALENS IN GENERATING SITE-SPECIFIC GENOME ALTERATIONS | 2014年 / 546卷
基金
欧洲研究理事会;
关键词
ONE-STEP GENERATION; T7; RNA-POLYMERASE; DNA CLEAVAGE; GUIDE RNA; CRISPR; PURIFICATION; SPECIFICITY; ENDONUCLEASE; MUTAGENESIS; NUCLEASES;
D O I
10.1016/B978-0-12-801185-0.00001-5
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Cas9 is a bacterial RNA-guided endonuclease that uses base pairing to recognize and cleave target DNAs with complementarity to the guide RNA. The programmable sequence specificity of Cas9 has been harnessed for genome editing and gene expression control in many organisms. Here, we describe protocols for the heterologous expression and purification of recombinant Cas9 protein and for in vitro transcription of guide RNAs. We describe in vitro reconstitution of the Cas9-guide RNA ribonucleoprotein complex and its use in endonuclease activity assays. The methods outlined here enable mechanistic characterization of the RNA-guided DNA cleavage activity of Cas9 and may assist in further development of the enzyme for genetic engineering applications.
引用
收藏
页码:1 / 20
页数:20
相关论文
共 49 条
[21]   Structures of Cas9 Endonucleases Reveal RNA-Mediated Conformational Activation [J].
Jinek, Martin ;
Jiang, Fuguo ;
Taylor, David W. ;
Sternberg, Samuel H. ;
Kaya, Emine ;
Ma, Enbo ;
Anders, Carolin ;
Hauer, Michael ;
Zhou, Kaihong ;
Lin, Steven ;
Kaplan, Matias ;
Iavarone, Anthony T. ;
Charpentier, Emmanuelle ;
Nogales, Eva ;
Doudna, Jennifer A. .
SCIENCE, 2014, 343 (6176) :1215-+
[22]   RNA-programmed genome editing in human cells [J].
Jinek, Martin ;
East, Alexandra ;
Cheng, Aaron ;
Lin, Steven ;
Ma, Enbo ;
Doudna, Jennifer .
ELIFE, 2013, 2
[23]   A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity [J].
Jinek, Martin ;
Chylinski, Krzysztof ;
Fonfara, Ines ;
Hauer, Michael ;
Doudna, Jennifer A. ;
Charpentier, Emmanuelle .
SCIENCE, 2012, 337 (6096) :816-821
[24]   crRNA and tracrRNA guide Cas9-mediated DNA interference in Streptococcus thermophilus [J].
Karvelis, Tautvydas ;
Gasiunas, Giedrius ;
Miksys, Algirdas ;
Barrangou, Rodolphe ;
Horvath, Philippe ;
Siksnys, Virginijus .
RNA BIOLOGY, 2013, 10 (05) :841-851
[25]   Targeted Heritable Mutation and Gene Conversion by Cas9-CRISPR in Caenorhabditis elegans [J].
Katic, Iskra ;
Grosshans, Helge .
GENETICS, 2013, 195 (03) :1173-1176
[26]   OligoCalc: an online oligonucleotide properties calculator [J].
Kibbe, Warren A. .
NUCLEIC ACIDS RESEARCH, 2007, 35 :W43-W46
[27]   Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9 [J].
Li, Jian-Feng ;
Norville, Julie E. ;
Aach, John ;
McCormack, Matthew ;
Zhang, Dandan ;
Bush, Jenifer ;
Church, George M. ;
Sheen, Jen .
NATURE BIOTECHNOLOGY, 2013, 31 (08) :688-691
[28]   A modified procedure for fast purification of T7 RNA polymerase [J].
Li, Y ;
Wang, ED ;
Wang, YL .
PROTEIN EXPRESSION AND PURIFICATION, 1999, 16 (02) :355-358
[29]   Precise and Heritable Genome Editing in Evolutionarily Diverse Nematodes Using TALENs and CRISPR/Cas9 to Engineer Insertions and Deletions [J].
Lo, Te-Wen ;
Pickle, Catherine S. ;
Lin, Steven ;
Ralston, Edward J. ;
Gurling, Mark ;
Schartner, Caitlin M. ;
Bian, Qian ;
Doudna, Jennifer A. ;
Meyer, Barbara J. .
GENETICS, 2013, 195 (02) :331-+
[30]   Purification of DNA Oligos by Denaturing Polyacrylamide Gel Electrophoresis (PAGE) [J].
Lopez-Gomollon, Sara ;
Nicolas, Francisco Esteban .
LABORATORY METHODS IN ENZYMOLOGY: DNA, 2013, 529 :65-83