Misunderstandings about isochores. Part 1

被引：94

作者：

Bernardi, G ^{[1
]}

机构：

[1] Staz Zool Anton Dohrn, Lab Mol Evolut, I-80121 Naples, Italy

来源：

GENE | 2001年 / 276卷 / 1-2期

关键词：

genome organization; genome evolution; repeats; mutational bias; gene distribution;

D O I：

10.1016/S0378-1119(01)00644-8

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

A few months ago the International Human Genome Sequencing Consortium (IHGSC) published a 61-page paper on the human genome (IHGSC, Nature 409 (2001) 860). Here comments will be presented on some points of the paper that were previously investigated in our laboratory, and some misunderstandings and misconceptions about the organization and the evolutionary history of the human genome will be discussed. A very recent article on the same subject (Eyre-Walker and Hurst, Nat. Rev. Genet. 2 (2001) 549) will also be addressed. The present paper is a complement to two review articles which were published last year (Bernardi, Gene 241 (2000) 3; Gene 259(1) (2000) 3 1). (C) 2001 Elsevier Science B.V. All rights reserved.

引用

页码：3 / 13

页数：11

共 73 条

[41] ORGANIZATION OF MUTATIONS ALONG THE GENOME - A PRIME DETERMINANT OF GENOME EVOLUTION
HOLMQUIST, GP
FILIPSKI, J
[J]. TRENDS IN ECOLOGY & EVOLUTION, 1994, 9 (02) : 65 - 69
[42] CpG doublets, CpG islands and Alu repeats in long human DNA sequences from different isochore families
Jabbari, K
Bernardi, G
[J]. GENE, 1998, 224 (1-2) : 123 - 128
[43] Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons
Jurka, J
[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (05) : 1872 - 1877
[44] Initial sequencing and analysis of the human genome
Lander, ES
Int Human Genome Sequencing Consortium
Linton, LM
Birren, B
Nusbaum, C
Zody, MC
Baldwin, J
Devon, K
Dewar, K
Doyle, M
FitzHugh, W
Funke, R
Gage, D
Harris, K
Heaford, A
Howland, J
Kann, L
Lehoczky, J
LeVine, R
McEwan, P
McKernan, K
Meldrim, J
Mesirov, JP
Miranda, C
Morris, W
Naylor, J
Raymond, C
Rosetti, M
Santos, R
Sheridan, A
Sougnez, C
Stange-Thomann, N
Stojanovic, N
Subramanian, A
Wyman, D
Rogers, J
Sulston, J
Ainscough, R
Beck, S
Bentley, D
Burton, J
Clee, C
Carter, N
Coulson, A
Deadman, R
Deloukas, P
Dunham, A
Dunham, I
Durbin, R
French, L
[J]. NATURE, 2001, 409 (6822) : 860 - 921
[45] CPG ISLANDS AS GENE MARKERS IN THE HUMAN GENOME
LARSEN, F
GUNDERSEN, G
LOPEZ, R
PRYDZ, H
[J]. GENOMICS, 1992, 13 (04) : 1095 - 1107
[46] APPROACH TO ORGANIZATION OF EUKARYOTIC GENOMES AT A MACROMOLECULAR LEVEL
MACAYA, G
THIERY, JP
BERNARDI, G
[J]. JOURNAL OF MOLECULAR BIOLOGY, 1976, 108 (01) : 237 - 254
[47] DNA PRECURSOR ASYMMETRIES, REPLICATION FIDELITY, AND VARIABLE GENOME EVOLUTION
MATHEWS, CK
JI, JP
[J]. BIOESSAYS, 1992, 14 (05) : 295 - 301
[48] SEQUENCE ORGANIZATION AND GENOMIC DISTRIBUTION OF THE MAJOR FAMILY OF INTERSPERSED REPEATS OF MOUSE DNA
MEUNIERROTIVAL, M
SORIANO, P
CUNY, G
STRAUSS, F
BERNARDI, G
[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1982, 79 (02): : 355 - 359
[49] THE DISTRIBUTION OF GENES IN THE HUMAN GENOME
MOUCHIROUD, D
DONOFRIO, G
AISSANI, B
MACAYA, G
GAUTIER, C
BERNARDI, G
[J]. GENE, 1991, 100 : 181 - 187
[50] Assessment of compositional heterogeneity within and between eukaryotic genomes
Nekrutenko, A
Li, WH
[J]. GENOME RESEARCH, 2000, 10 (12) : 1986 - 1995

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